Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Gm13487-201ENSMUST00000122240 864 ntBASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 1700023C21Rik-201ENSMUST00000143247 389 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Mir1982-201ENSMUST00000157368 74 ntBASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 2810404M03Rik-201ENSMUST00000188324 1245 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Gm42588-201ENSMUST00000200538 1297 ntBASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Gm8227-201ENSMUST00000223306 571 ntBASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 AC118006.2-201ENSMUST00000224167 962 ntBASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Itm2b-204ENSMUST00000228637 783 ntBASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Gm26315-201ENSMUST00000083890 321 ntBASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.32□□□□□ -0.44
Pcdhb3Q91XZ7 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Olfr23-202ENSMUST00000214210 2527 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Gm13612-201ENSMUST00000119276 390 ntBASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Gm15225-201ENSMUST00000120449 1017 ntBASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Gm8652-201ENSMUST00000181363 964 ntBASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Gm18352-201ENSMUST00000189113 902 ntBASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 AC118750.1-201ENSMUST00000214163 675 ntTSL 3 BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Gm18473-201ENSMUST00000220543 868 ntBASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb3Q91XZ7 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms