Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.43□□□□□ -0.42
Pcdhb6Q91XZ4 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb6Q91XZ4 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb6Q91XZ4 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb6Q91XZ4 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb6Q91XZ4 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb6Q91XZ4 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdhb6Q91XZ4 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb6Q91XZ4 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb6Q91XZ4 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb6Q91XZ4 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb6Q91XZ4 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb6Q91XZ4 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb6Q91XZ4 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb6Q91XZ4 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb6Q91XZ4 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhb6Q91XZ4 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Gm44364-201ENSMUST00000198368 141 ntBASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Gm45331-201ENSMUST00000209868 554 ntBASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Gm45598-202ENSMUST00000210719 986 ntBASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb6Q91XZ4 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 AA914427-201ENSMUST00000193194 1166 ntBASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Rprl1-202ENSMUST00000198476 238 ntBASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms