Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Trex1Q91XB0 Snora73b-201ENSMUST00000083419 205 ntBASIC13.83□□□□□ -0.2
Trex1Q91XB0 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Trex1Q91XB0 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trex1Q91XB0 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trex1Q91XB0 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trex1Q91XB0 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trex1Q91XB0 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Trex1Q91XB0 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trex1Q91XB0 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trex1Q91XB0 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trex1Q91XB0 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trex1Q91XB0 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trex1Q91XB0 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trex1Q91XB0 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trex1Q91XB0 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trex1Q91XB0 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trex1Q91XB0 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trex1Q91XB0 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trex1Q91XB0 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trex1Q91XB0 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Trex1Q91XB0 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trex1Q91XB0 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Trex1Q91XB0 Gm22920-201ENSMUST00000102175 109 ntBASIC13.82□□□□□ -0.2
Trex1Q91XB0 Gm14193-201ENSMUST00000105067 153 ntBASIC13.82□□□□□ -0.2
Trex1Q91XB0 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trex1Q91XB0 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC13.82□□□□□ -0.2
Trex1Q91XB0 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC13.82□□□□□ -0.2
Trex1Q91XB0 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trex1Q91XB0 Gm9034-201ENSMUST00000182071 1005 ntBASIC13.82□□□□□ -0.2
Trex1Q91XB0 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC13.82□□□□□ -0.2
Trex1Q91XB0 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC13.82□□□□□ -0.2
Trex1Q91XB0 Gm2553-201ENSMUST00000215986 605 ntBASIC13.82□□□□□ -0.2
Trex1Q91XB0 AC140293.1-201ENSMUST00000225626 1247 ntBASIC13.82□□□□□ -0.2
Trex1Q91XB0 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trex1Q91XB0 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.82□□□□□ -0.2
Trex1Q91XB0 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trex1Q91XB0 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trex1Q91XB0 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trex1Q91XB0 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trex1Q91XB0 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.82□□□□□ -0.2
Trex1Q91XB0 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trex1Q91XB0 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trex1Q91XB0 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trex1Q91XB0 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trex1Q91XB0 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trex1Q91XB0 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trex1Q91XB0 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trex1Q91XB0 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trex1Q91XB0 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trex1Q91XB0 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trex1Q91XB0 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trex1Q91XB0 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trex1Q91XB0 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trex1Q91XB0 Gm11949-201ENSMUST00000117640 372 ntBASIC13.81□□□□□ -0.2
Trex1Q91XB0 Gm15725-201ENSMUST00000119947 1090 ntBASIC13.81□□□□□ -0.2
Trex1Q91XB0 Gm11246-201ENSMUST00000120880 345 ntBASIC13.81□□□□□ -0.2
Trex1Q91XB0 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC13.81□□□□□ -0.2
Trex1Q91XB0 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trex1Q91XB0 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC13.81□□□□□ -0.2
Trex1Q91XB0 Gm5778-201ENSMUST00000171003 1072 ntBASIC13.81□□□□□ -0.2
Trex1Q91XB0 Gm29499-201ENSMUST00000189151 486 ntBASIC13.81□□□□□ -0.2
Trex1Q91XB0 Gm28329-201ENSMUST00000191208 689 ntBASIC13.81□□□□□ -0.2
Trex1Q91XB0 Gm29171-201ENSMUST00000191397 486 ntBASIC13.81□□□□□ -0.2
Trex1Q91XB0 Gm43830-201ENSMUST00000198760 1067 ntBASIC13.81□□□□□ -0.2
Trex1Q91XB0 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trex1Q91XB0 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC13.81□□□□□ -0.2
Trex1Q91XB0 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC13.81□□□□□ -0.2
Trex1Q91XB0 Gm2517-201ENSMUST00000215651 348 ntBASIC13.81□□□□□ -0.2
Trex1Q91XB0 CT485607.1-201ENSMUST00000216100 85 ntBASIC13.81□□□□□ -0.2
Trex1Q91XB0 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trex1Q91XB0 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trex1Q91XB0 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trex1Q91XB0 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trex1Q91XB0 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trex1Q91XB0 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Trex1Q91XB0 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trex1Q91XB0 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trex1Q91XB0 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trex1Q91XB0 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trex1Q91XB0 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trex1Q91XB0 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trex1Q91XB0 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trex1Q91XB0 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trex1Q91XB0 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trex1Q91XB0 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.81□□□□□ -0.2
Trex1Q91XB0 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trex1Q91XB0 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trex1Q91XB0 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trex1Q91XB0 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trex1Q91XB0 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trex1Q91XB0 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trex1Q91XB0 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trex1Q91XB0 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trex1Q91XB0 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC13.8□□□□□ -0.2
Trex1Q91XB0 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC13.8□□□□□ -0.2
Trex1Q91XB0 Gm5380-201ENSMUST00000119296 2136 ntBASIC13.8□□□□□ -0.2
Trex1Q91XB0 Gm13328-201ENSMUST00000120816 1020 ntBASIC13.8□□□□□ -0.2
Trex1Q91XB0 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trex1Q91XB0 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms