Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC13.94□□□□□ -0.18
Ddx41Q91VN6 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx41Q91VN6 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx41Q91VN6 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx41Q91VN6 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx41Q91VN6 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx41Q91VN6 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx41Q91VN6 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx41Q91VN6 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.94□□□□□ -0.18
Ddx41Q91VN6 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx41Q91VN6 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx41Q91VN6 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Ddx41Q91VN6 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx41Q91VN6 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx41Q91VN6 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.93□□□□□ -0.18
Ddx41Q91VN6 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ddx41Q91VN6 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx41Q91VN6 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ddx41Q91VN6 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx41Q91VN6 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx41Q91VN6 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx41Q91VN6 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.93□□□□□ -0.18
Ddx41Q91VN6 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx41Q91VN6 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ddx41Q91VN6 Gm14644-201ENSMUST00000116671 647 ntBASIC13.93□□□□□ -0.18
Ddx41Q91VN6 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.93□□□□□ -0.18
Ddx41Q91VN6 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx41Q91VN6 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC13.93□□□□□ -0.18
Ddx41Q91VN6 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Ddx41Q91VN6 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx41Q91VN6 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ddx41Q91VN6 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Ddx41Q91VN6 Mir6927-201ENSMUST00000184494 71 ntBASIC13.93□□□□□ -0.18
Ddx41Q91VN6 Gm32999-201ENSMUST00000192693 562 ntBASIC13.93□□□□□ -0.18
Ddx41Q91VN6 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Ddx41Q91VN6 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx41Q91VN6 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Ddx41Q91VN6 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx41Q91VN6 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Ddx41Q91VN6 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx41Q91VN6 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx41Q91VN6 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx41Q91VN6 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ddx41Q91VN6 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.93□□□□□ -0.18
Ddx41Q91VN6 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ddx41Q91VN6 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx41Q91VN6 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx41Q91VN6 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx41Q91VN6 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx41Q91VN6 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ddx41Q91VN6 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx41Q91VN6 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.93□□□□□ -0.18
Ddx41Q91VN6 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Gm9333-201ENSMUST00000205452 1323 ntBASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Gm25732-201ENSMUST00000175168 60 ntBASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Gm28450-201ENSMUST00000187349 638 ntBASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Gm18304-201ENSMUST00000189162 546 ntBASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Gm45433-201ENSMUST00000209386 247 ntBASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx41Q91VN6 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx41Q91VN6 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx41Q91VN6 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx41Q91VN6 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx41Q91VN6 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms