Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Rpap2Q8VC34 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rpap2Q8VC34 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Rpap2Q8VC34 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpap2Q8VC34 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpap2Q8VC34 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpap2Q8VC34 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rpap2Q8VC34 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpap2Q8VC34 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpap2Q8VC34 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpap2Q8VC34 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.27□□□□□ -0.29
Rpap2Q8VC34 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC13.27□□□□□ -0.29
Rpap2Q8VC34 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpap2Q8VC34 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpap2Q8VC34 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Rpap2Q8VC34 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Rpap2Q8VC34 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Rpap2Q8VC34 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpap2Q8VC34 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Rpap2Q8VC34 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpap2Q8VC34 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpap2Q8VC34 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpap2Q8VC34 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Rpap2Q8VC34 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Rpap2Q8VC34 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.26□□□□□ -0.29
Rpap2Q8VC34 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpap2Q8VC34 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.26□□□□□ -0.29
Rpap2Q8VC34 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rpap2Q8VC34 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rpap2Q8VC34 Gm26361-201ENSMUST00000158868 186 ntBASIC13.26□□□□□ -0.29
Rpap2Q8VC34 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpap2Q8VC34 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.26□□□□□ -0.29
Rpap2Q8VC34 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.26□□□□□ -0.29
Rpap2Q8VC34 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.26□□□□□ -0.29
Rpap2Q8VC34 AC171277.1-201ENSMUST00000216902 1441 ntBASIC13.26□□□□□ -0.29
Rpap2Q8VC34 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.26□□□□□ -0.29
Rpap2Q8VC34 AC108858.2-201ENSMUST00000228186 1425 ntBASIC13.26□□□□□ -0.29
Rpap2Q8VC34 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpap2Q8VC34 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpap2Q8VC34 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpap2Q8VC34 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Rpap2Q8VC34 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpap2Q8VC34 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpap2Q8VC34 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rpap2Q8VC34 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpap2Q8VC34 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpap2Q8VC34 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Rpap2Q8VC34 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpap2Q8VC34 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rpap2Q8VC34 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpap2Q8VC34 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpap2Q8VC34 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpap2Q8VC34 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpap2Q8VC34 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Rpap2Q8VC34 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Rpap2Q8VC34 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpap2Q8VC34 AC138329.2-201ENSMUST00000225579 1842 ntBASIC13.25□□□□□ -0.29
Rpap2Q8VC34 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpap2Q8VC34 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Rpap2Q8VC34 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.25□□□□□ -0.29
Rpap2Q8VC34 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpap2Q8VC34 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpap2Q8VC34 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.25□□□□□ -0.29
Rpap2Q8VC34 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rpap2Q8VC34 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpap2Q8VC34 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpap2Q8VC34 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC13.25□□□□□ -0.29
Rpap2Q8VC34 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Rpap2Q8VC34 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.25□□□□□ -0.29
Rpap2Q8VC34 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.25□□□□□ -0.29
Rpap2Q8VC34 AC153954.1-201ENSMUST00000216959 255 ntBASIC13.25□□□□□ -0.29
Rpap2Q8VC34 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.25□□□□□ -0.29
Rpap2Q8VC34 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Rpap2Q8VC34 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpap2Q8VC34 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpap2Q8VC34 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Rpap2Q8VC34 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpap2Q8VC34 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpap2Q8VC34 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rpap2Q8VC34 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpap2Q8VC34 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpap2Q8VC34 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpap2Q8VC34 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rpap2Q8VC34 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpap2Q8VC34 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rpap2Q8VC34 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpap2Q8VC34 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpap2Q8VC34 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.25□□□□□ -0.29
Rpap2Q8VC34 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpap2Q8VC34 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpap2Q8VC34 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Rpap2Q8VC34 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rpap2Q8VC34 Gm2238-201ENSMUST00000192074 3669 ntBASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 94.8 ms