Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Trim29Q8R2Q0 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim29Q8R2Q0 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trim29Q8R2Q0 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trim29Q8R2Q0 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim29Q8R2Q0 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim29Q8R2Q0 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim29Q8R2Q0 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim29Q8R2Q0 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim29Q8R2Q0 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim29Q8R2Q0 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim29Q8R2Q0 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim29Q8R2Q0 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Trim29Q8R2Q0 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim29Q8R2Q0 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim29Q8R2Q0 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim29Q8R2Q0 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim29Q8R2Q0 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.82□□□□□ -0.2
Trim29Q8R2Q0 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.82□□□□□ -0.2
Trim29Q8R2Q0 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim29Q8R2Q0 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.82□□□□□ -0.2
Trim29Q8R2Q0 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.82□□□□□ -0.2
Trim29Q8R2Q0 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.82□□□□□ -0.2
Trim29Q8R2Q0 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trim29Q8R2Q0 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim29Q8R2Q0 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trim29Q8R2Q0 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.82□□□□□ -0.2
Trim29Q8R2Q0 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim29Q8R2Q0 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim29Q8R2Q0 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim29Q8R2Q0 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trim29Q8R2Q0 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim29Q8R2Q0 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim29Q8R2Q0 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim29Q8R2Q0 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim29Q8R2Q0 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trim29Q8R2Q0 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim29Q8R2Q0 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim29Q8R2Q0 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim29Q8R2Q0 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim29Q8R2Q0 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim29Q8R2Q0 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim29Q8R2Q0 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Trim29Q8R2Q0 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim29Q8R2Q0 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Trim29Q8R2Q0 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim29Q8R2Q0 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim29Q8R2Q0 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC13.81□□□□□ -0.2
Trim29Q8R2Q0 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.81□□□□□ -0.2
Trim29Q8R2Q0 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim29Q8R2Q0 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trim29Q8R2Q0 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.81□□□□□ -0.2
Trim29Q8R2Q0 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim29Q8R2Q0 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trim29Q8R2Q0 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trim29Q8R2Q0 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim29Q8R2Q0 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.81□□□□□ -0.2
Trim29Q8R2Q0 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim29Q8R2Q0 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim29Q8R2Q0 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.81□□□□□ -0.2
Trim29Q8R2Q0 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim29Q8R2Q0 Gm6334-201ENSMUST00000207083 228 ntBASIC13.81□□□□□ -0.2
Trim29Q8R2Q0 Gm8712-201ENSMUST00000221090 701 ntBASIC13.81□□□□□ -0.2
Trim29Q8R2Q0 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim29Q8R2Q0 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trim29Q8R2Q0 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trim29Q8R2Q0 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim29Q8R2Q0 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim29Q8R2Q0 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim29Q8R2Q0 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC13.81□□□□□ -0.2
Trim29Q8R2Q0 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.81□□□□□ -0.2
Trim29Q8R2Q0 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim29Q8R2Q0 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim29Q8R2Q0 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.81□□□□□ -0.2
Trim29Q8R2Q0 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim29Q8R2Q0 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.81□□□□□ -0.2
Trim29Q8R2Q0 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim29Q8R2Q0 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC13.81□□□□□ -0.2
Trim29Q8R2Q0 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim29Q8R2Q0 Map1b-203ENSMUST00000223725 2669 ntBASIC13.8□□□□□ -0.2
Trim29Q8R2Q0 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim29Q8R2Q0 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim29Q8R2Q0 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim29Q8R2Q0 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim29Q8R2Q0 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim29Q8R2Q0 Gm23270-201ENSMUST00000104055 131 ntBASIC13.8□□□□□ -0.2
Trim29Q8R2Q0 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trim29Q8R2Q0 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Trim29Q8R2Q0 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim29Q8R2Q0 Gm12036-201ENSMUST00000120008 530 ntBASIC13.8□□□□□ -0.2
Trim29Q8R2Q0 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.8□□□□□ -0.2
Trim29Q8R2Q0 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim29Q8R2Q0 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trim29Q8R2Q0 Gm9230-201ENSMUST00000188228 532 ntBASIC13.8□□□□□ -0.2
Trim29Q8R2Q0 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13.8□□□□□ -0.2
Trim29Q8R2Q0 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.8□□□□□ -0.2
Trim29Q8R2Q0 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim29Q8R2Q0 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.8□□□□□ -0.2
Trim29Q8R2Q0 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.8□□□□□ -0.2
Trim29Q8R2Q0 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms