Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CroccQ8CJ40 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CroccQ8CJ40 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.56□□□□□ -0.56
CroccQ8CJ40 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
CroccQ8CJ40 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
CroccQ8CJ40 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CroccQ8CJ40 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.56□□□□□ -0.56
CroccQ8CJ40 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
CroccQ8CJ40 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.56□□□□□ -0.56
CroccQ8CJ40 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CroccQ8CJ40 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
CroccQ8CJ40 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.55□□□□□ -0.56
CroccQ8CJ40 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CroccQ8CJ40 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Gm26083-201ENSMUST00000157904 193 ntBASIC11.55□□□□□ -0.56
CroccQ8CJ40 Gm43962-201ENSMUST00000203898 190 ntBASIC11.55□□□□□ -0.56
CroccQ8CJ40 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.55□□□□□ -0.56
CroccQ8CJ40 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.55□□□□□ -0.56
CroccQ8CJ40 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CroccQ8CJ40 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CroccQ8CJ40 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.55□□□□□ -0.56
CroccQ8CJ40 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CroccQ8CJ40 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CroccQ8CJ40 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CroccQ8CJ40 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.54□□□□□ -0.56
CroccQ8CJ40 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
CroccQ8CJ40 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CroccQ8CJ40 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
CroccQ8CJ40 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
CroccQ8CJ40 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CroccQ8CJ40 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.54□□□□□ -0.56
CroccQ8CJ40 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CroccQ8CJ40 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CroccQ8CJ40 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CroccQ8CJ40 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CroccQ8CJ40 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CroccQ8CJ40 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
CroccQ8CJ40 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.54□□□□□ -0.56
CroccQ8CJ40 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.54□□□□□ -0.56
CroccQ8CJ40 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.54□□□□□ -0.56
CroccQ8CJ40 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
CroccQ8CJ40 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.54□□□□□ -0.56
CroccQ8CJ40 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
CroccQ8CJ40 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
CroccQ8CJ40 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
CroccQ8CJ40 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
CroccQ8CJ40 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CroccQ8CJ40 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CroccQ8CJ40 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CroccQ8CJ40 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CroccQ8CJ40 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CroccQ8CJ40 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CroccQ8CJ40 Gm12164-201ENSMUST00000121695 551 ntBASIC11.54□□□□□ -0.56
CroccQ8CJ40 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CroccQ8CJ40 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CroccQ8CJ40 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CroccQ8CJ40 Gm20482-202ENSMUST00000174729 825 ntBASIC11.54□□□□□ -0.56
CroccQ8CJ40 Gm25890-201ENSMUST00000177643 165 ntBASIC11.54□□□□□ -0.56
CroccQ8CJ40 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.54□□□□□ -0.56
CroccQ8CJ40 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.54□□□□□ -0.56
CroccQ8CJ40 Gm22614-201ENSMUST00000178300 165 ntBASIC11.54□□□□□ -0.56
CroccQ8CJ40 Gm9230-201ENSMUST00000188228 532 ntBASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms