Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Clip4Q8CI96 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clip4Q8CI96 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clip4Q8CI96 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clip4Q8CI96 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clip4Q8CI96 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clip4Q8CI96 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Clip4Q8CI96 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clip4Q8CI96 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clip4Q8CI96 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clip4Q8CI96 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clip4Q8CI96 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clip4Q8CI96 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clip4Q8CI96 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
Clip4Q8CI96 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clip4Q8CI96 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Clip4Q8CI96 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clip4Q8CI96 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clip4Q8CI96 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clip4Q8CI96 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clip4Q8CI96 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clip4Q8CI96 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clip4Q8CI96 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clip4Q8CI96 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Clip4Q8CI96 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.21□□□□□ -0.45
Clip4Q8CI96 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clip4Q8CI96 Gm22323-201ENSMUST00000103832 109 ntBASIC12.21□□□□□ -0.45
Clip4Q8CI96 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clip4Q8CI96 Gm11531-201ENSMUST00000117614 555 ntBASIC12.21□□□□□ -0.45
Clip4Q8CI96 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.21□□□□□ -0.45
Clip4Q8CI96 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Clip4Q8CI96 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.21□□□□□ -0.45
Clip4Q8CI96 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Clip4Q8CI96 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.21□□□□□ -0.45
Clip4Q8CI96 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Clip4Q8CI96 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.21□□□□□ -0.45
Clip4Q8CI96 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.21□□□□□ -0.45
Clip4Q8CI96 Gm27390-201ENSMUST00000184516 176 ntBASIC12.21□□□□□ -0.45
Clip4Q8CI96 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.21□□□□□ -0.45
Clip4Q8CI96 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.21□□□□□ -0.45
Clip4Q8CI96 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clip4Q8CI96 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clip4Q8CI96 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clip4Q8CI96 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.21□□□□□ -0.46
Clip4Q8CI96 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Clip4Q8CI96 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Clip4Q8CI96 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Clip4Q8CI96 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Clip4Q8CI96 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clip4Q8CI96 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clip4Q8CI96 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clip4Q8CI96 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Clip4Q8CI96 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clip4Q8CI96 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clip4Q8CI96 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Clip4Q8CI96 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
Clip4Q8CI96 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.21□□□□□ -0.46
Clip4Q8CI96 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clip4Q8CI96 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clip4Q8CI96 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clip4Q8CI96 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clip4Q8CI96 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clip4Q8CI96 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.2□□□□□ -0.46
Clip4Q8CI96 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clip4Q8CI96 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clip4Q8CI96 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clip4Q8CI96 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clip4Q8CI96 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clip4Q8CI96 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clip4Q8CI96 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clip4Q8CI96 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clip4Q8CI96 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clip4Q8CI96 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clip4Q8CI96 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clip4Q8CI96 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.2□□□□□ -0.46
Clip4Q8CI96 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
Clip4Q8CI96 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.2□□□□□ -0.46
Clip4Q8CI96 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.2□□□□□ -0.46
Clip4Q8CI96 Gm14726-201ENSMUST00000120623 896 ntBASIC12.2□□□□□ -0.46
Clip4Q8CI96 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Clip4Q8CI96 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
Clip4Q8CI96 Gm37259-201ENSMUST00000193903 849 ntBASIC12.2□□□□□ -0.46
Clip4Q8CI96 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.2□□□□□ -0.46
Clip4Q8CI96 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clip4Q8CI96 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clip4Q8CI96 Gm9257-201ENSMUST00000221254 232 ntBASIC12.2□□□□□ -0.46
Clip4Q8CI96 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clip4Q8CI96 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clip4Q8CI96 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clip4Q8CI96 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clip4Q8CI96 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clip4Q8CI96 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clip4Q8CI96 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clip4Q8CI96 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Clip4Q8CI96 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clip4Q8CI96 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clip4Q8CI96 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Clip4Q8CI96 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clip4Q8CI96 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Clip4Q8CI96 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms