Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Col16a1Q8BLX7 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC15.59■□□□□ 0.09
Col16a1Q8BLX7 AC164618.2-201ENSMUST00000224770 573 ntBASIC15.59■□□□□ 0.09
Col16a1Q8BLX7 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col16a1Q8BLX7 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col16a1Q8BLX7 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col16a1Q8BLX7 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col16a1Q8BLX7 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
Col16a1Q8BLX7 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.59■□□□□ 0.09
Col16a1Q8BLX7 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Col16a1Q8BLX7 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col16a1Q8BLX7 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col16a1Q8BLX7 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col16a1Q8BLX7 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col16a1Q8BLX7 Gm10728-201ENSMUST00000194292 1829 ntBASIC15.59■□□□□ 0.09
Col16a1Q8BLX7 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col16a1Q8BLX7 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col16a1Q8BLX7 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col16a1Q8BLX7 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col16a1Q8BLX7 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Col16a1Q8BLX7 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.58■□□□□ 0.09
Col16a1Q8BLX7 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Col16a1Q8BLX7 AC158636.1-201ENSMUST00000220118 1393 ntBASIC15.58■□□□□ 0.09
Col16a1Q8BLX7 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Col16a1Q8BLX7 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Col16a1Q8BLX7 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC15.58■□□□□ 0.09
Col16a1Q8BLX7 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC15.58■□□□□ 0.09
Col16a1Q8BLX7 Gm18499-201ENSMUST00000220808 1021 ntBASIC15.58■□□□□ 0.09
Col16a1Q8BLX7 AC130477.1-201ENSMUST00000226982 420 ntBASIC15.58■□□□□ 0.09
Col16a1Q8BLX7 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Col16a1Q8BLX7 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Col16a1Q8BLX7 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Col16a1Q8BLX7 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col16a1Q8BLX7 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC15.58■□□□□ 0.08
Col16a1Q8BLX7 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col16a1Q8BLX7 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col16a1Q8BLX7 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Col16a1Q8BLX7 Gm19680-201ENSMUST00000095050 1513 ntBASIC15.58■□□□□ 0.08
Col16a1Q8BLX7 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.58■□□□□ 0.08
Col16a1Q8BLX7 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col16a1Q8BLX7 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC15.58■□□□□ 0.08
Col16a1Q8BLX7 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC15.58■□□□□ 0.08
Col16a1Q8BLX7 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col16a1Q8BLX7 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
Col16a1Q8BLX7 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC15.58■□□□□ 0.08
Col16a1Q8BLX7 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Col16a1Q8BLX7 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col16a1Q8BLX7 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC15.58■□□□□ 0.08
Col16a1Q8BLX7 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Col16a1Q8BLX7 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Col16a1Q8BLX7 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Col16a1Q8BLX7 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC15.58■□□□□ 0.08
Col16a1Q8BLX7 Gm9081-201ENSMUST00000182346 991 ntBASIC15.58■□□□□ 0.08
Col16a1Q8BLX7 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col16a1Q8BLX7 Gm28833-201ENSMUST00000189671 559 ntBASIC15.58■□□□□ 0.08
Col16a1Q8BLX7 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC15.57■□□□□ 0.08
Col16a1Q8BLX7 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Col16a1Q8BLX7 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col16a1Q8BLX7 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col16a1Q8BLX7 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col16a1Q8BLX7 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col16a1Q8BLX7 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Col16a1Q8BLX7 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Col16a1Q8BLX7 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Col16a1Q8BLX7 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col16a1Q8BLX7 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col16a1Q8BLX7 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col16a1Q8BLX7 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Col16a1Q8BLX7 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col16a1Q8BLX7 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col16a1Q8BLX7 Gm18798-201ENSMUST00000187264 1700 ntBASIC15.57■□□□□ 0.08
Col16a1Q8BLX7 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
Col16a1Q8BLX7 Gm4294-201ENSMUST00000105169 614 ntBASIC15.57■□□□□ 0.08
Col16a1Q8BLX7 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col16a1Q8BLX7 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Col16a1Q8BLX7 Gm25492-201ENSMUST00000157383 129 ntBASIC15.57■□□□□ 0.08
Col16a1Q8BLX7 Gm22379-201ENSMUST00000157480 131 ntBASIC15.57■□□□□ 0.08
Col16a1Q8BLX7 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Col16a1Q8BLX7 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC15.57■□□□□ 0.08
Col16a1Q8BLX7 AC153152.3-201ENSMUST00000222188 1135 ntBASIC15.57■□□□□ 0.08
Col16a1Q8BLX7 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col16a1Q8BLX7 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col16a1Q8BLX7 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Col16a1Q8BLX7 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC15.56■□□□□ 0.08
Col16a1Q8BLX7 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col16a1Q8BLX7 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col16a1Q8BLX7 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Col16a1Q8BLX7 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col16a1Q8BLX7 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col16a1Q8BLX7 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Col16a1Q8BLX7 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col16a1Q8BLX7 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col16a1Q8BLX7 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Col16a1Q8BLX7 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col16a1Q8BLX7 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col16a1Q8BLX7 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col16a1Q8BLX7 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC15.56■□□□□ 0.08
Col16a1Q8BLX7 Gm24809-201ENSMUST00000175318 271 ntBASIC15.56■□□□□ 0.08
Col16a1Q8BLX7 Gm5700-201ENSMUST00000191483 989 ntBASIC15.56■□□□□ 0.08
Col16a1Q8BLX7 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms