Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Snora78-201ENSMUST00000158630 128 ntBASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Gm9136-201ENSMUST00000193368 454 ntBASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Gm44958-201ENSMUST00000203734 736 ntBASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Gm10076-201ENSMUST00000073238 384 ntBASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf38Q8BI21 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf38Q8BI21 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf38Q8BI21 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf38Q8BI21 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf38Q8BI21 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf38Q8BI21 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Rnf38Q8BI21 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf38Q8BI21 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf38Q8BI21 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.71□□□□□ -0.54
Rnf38Q8BI21 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf38Q8BI21 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Rnf38Q8BI21 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf38Q8BI21 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf38Q8BI21 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Rnf38Q8BI21 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf38Q8BI21 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.7□□□□□ -0.54
Rnf38Q8BI21 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Gm24830-201ENSMUST00000102024 166 ntBASIC11.7□□□□□ -0.54
Rnf38Q8BI21 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.7□□□□□ -0.54
Rnf38Q8BI21 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Gm44487-201ENSMUST00000205145 325 ntBASIC11.7□□□□□ -0.54
Rnf38Q8BI21 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Snora73a-201ENSMUST00000082453 205 ntBASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Gm26232-201ENSMUST00000083360 166 ntBASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Gm10652-201ENSMUST00000199790 2622 ntBASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf38Q8BI21 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Rnf38Q8BI21 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms