Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clrn3Q8BHH8 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Gm12241-201ENSMUST00000118330 726 ntBASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Gm7399-201ENSMUST00000032395 858 ntBASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clrn3Q8BHH8 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Gm9083-201ENSMUST00000120423 819 ntBASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Gm26956-201ENSMUST00000182176 986 ntBASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Gm44882-201ENSMUST00000205702 802 ntBASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms