Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trim50Q810I2 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim50Q810I2 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.8□□□□□ -0.52
Trim50Q810I2 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trim50Q810I2 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim50Q810I2 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim50Q810I2 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim50Q810I2 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trim50Q810I2 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trim50Q810I2 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.8□□□□□ -0.52
Trim50Q810I2 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim50Q810I2 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim50Q810I2 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim50Q810I2 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trim50Q810I2 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim50Q810I2 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim50Q810I2 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim50Q810I2 Gm12015-201ENSMUST00000117065 843 ntBASIC11.8□□□□□ -0.52
Trim50Q810I2 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.8□□□□□ -0.52
Trim50Q810I2 Rprl1-201ENSMUST00000158050 327 ntBASIC11.8□□□□□ -0.52
Trim50Q810I2 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim50Q810I2 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.8□□□□□ -0.52
Trim50Q810I2 Gm7783-201ENSMUST00000204795 781 ntBASIC11.8□□□□□ -0.52
Trim50Q810I2 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.8□□□□□ -0.52
Trim50Q810I2 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim50Q810I2 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim50Q810I2 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trim50Q810I2 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim50Q810I2 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim50Q810I2 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim50Q810I2 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim50Q810I2 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trim50Q810I2 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim50Q810I2 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trim50Q810I2 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim50Q810I2 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Trim50Q810I2 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim50Q810I2 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.8□□□□□ -0.52
Trim50Q810I2 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.79□□□□□ -0.52
Trim50Q810I2 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.79□□□□□ -0.52
Trim50Q810I2 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.79□□□□□ -0.52
Trim50Q810I2 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim50Q810I2 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trim50Q810I2 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim50Q810I2 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.79□□□□□ -0.52
Trim50Q810I2 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim50Q810I2 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.79□□□□□ -0.52
Trim50Q810I2 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim50Q810I2 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.79□□□□□ -0.52
Trim50Q810I2 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.79□□□□□ -0.52
Trim50Q810I2 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Trim50Q810I2 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim50Q810I2 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim50Q810I2 Gm14644-201ENSMUST00000116671 647 ntBASIC11.79□□□□□ -0.52
Trim50Q810I2 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim50Q810I2 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim50Q810I2 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim50Q810I2 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.79□□□□□ -0.52
Trim50Q810I2 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.79□□□□□ -0.52
Trim50Q810I2 Gm27046-201ENSMUST00000182160 463 ntBASIC11.79□□□□□ -0.52
Trim50Q810I2 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim50Q810I2 Gm37259-201ENSMUST00000193903 849 ntBASIC11.79□□□□□ -0.52
Trim50Q810I2 Gm18711-201ENSMUST00000199341 750 ntBASIC11.79□□□□□ -0.52
Trim50Q810I2 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.79□□□□□ -0.52
Trim50Q810I2 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim50Q810I2 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.79□□□□□ -0.52
Trim50Q810I2 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim50Q810I2 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim50Q810I2 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim50Q810I2 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.79□□□□□ -0.52
Trim50Q810I2 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trim50Q810I2 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim50Q810I2 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trim50Q810I2 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Trim50Q810I2 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.79□□□□□ -0.52
Trim50Q810I2 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.79□□□□□ -0.52
Trim50Q810I2 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Trim50Q810I2 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.79□□□□□ -0.52
Trim50Q810I2 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim50Q810I2 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim50Q810I2 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim50Q810I2 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trim50Q810I2 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim50Q810I2 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.79□□□□□ -0.52
Trim50Q810I2 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim50Q810I2 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim50Q810I2 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim50Q810I2 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim50Q810I2 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim50Q810I2 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trim50Q810I2 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.78□□□□□ -0.52
Trim50Q810I2 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim50Q810I2 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.78□□□□□ -0.52
Trim50Q810I2 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.78□□□□□ -0.52
Trim50Q810I2 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim50Q810I2 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim50Q810I2 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim50Q810I2 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trim50Q810I2 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim50Q810I2 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms