Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Gm3332-201ENSMUST00000189337 928 ntBASIC11.59□□□□□ -0.55
Vrk1Q80X41 Gm5733-201ENSMUST00000190232 939 ntBASIC11.59□□□□□ -0.55
Vrk1Q80X41 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Gm44126-201ENSMUST00000204831 514 ntBASIC11.59□□□□□ -0.55
Vrk1Q80X41 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.59□□□□□ -0.55
Vrk1Q80X41 D9Wsu149-201ENSMUST00000214169 594 ntBASIC11.59□□□□□ -0.55
Vrk1Q80X41 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.59□□□□□ -0.55
Vrk1Q80X41 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.59□□□□□ -0.55
Vrk1Q80X41 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Vrk1Q80X41 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Vrk1Q80X41 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vrk1Q80X41 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Gm24891-201ENSMUST00000104391 136 ntBASIC11.58□□□□□ -0.56
Vrk1Q80X41 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.58□□□□□ -0.56
Vrk1Q80X41 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Vrk1Q80X41 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.58□□□□□ -0.56
Vrk1Q80X41 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Gm4157-201ENSMUST00000211647 679 ntBASIC11.58□□□□□ -0.56
Vrk1Q80X41 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.58□□□□□ -0.56
Vrk1Q80X41 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.58□□□□□ -0.56
Vrk1Q80X41 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vrk1Q80X41 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.58□□□□□ -0.56
Vrk1Q80X41 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vrk1Q80X41 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vrk1Q80X41 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.57□□□□□ -0.56
Vrk1Q80X41 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vrk1Q80X41 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Vrk1Q80X41 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Vrk1Q80X41 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vrk1Q80X41 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vrk1Q80X41 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.57□□□□□ -0.56
Vrk1Q80X41 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Vrk1Q80X41 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Vrk1Q80X41 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Vrk1Q80X41 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vrk1Q80X41 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Vrk1Q80X41 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vrk1Q80X41 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Vrk1Q80X41 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vrk1Q80X41 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms