Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC12.17□□□□□ -0.46
Usp8Q80U87 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Usp8Q80U87 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Usp8Q80U87 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp8Q80U87 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp8Q80U87 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usp8Q80U87 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.17□□□□□ -0.46
Usp8Q80U87 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp8Q80U87 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp8Q80U87 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usp8Q80U87 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usp8Q80U87 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp8Q80U87 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Usp8Q80U87 Gm13226-201ENSMUST00000117838 404 ntBASIC12.17□□□□□ -0.46
Usp8Q80U87 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usp8Q80U87 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.17□□□□□ -0.46
Usp8Q80U87 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.17□□□□□ -0.46
Usp8Q80U87 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usp8Q80U87 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.17□□□□□ -0.46
Usp8Q80U87 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usp8Q80U87 Gm9022-201ENSMUST00000182482 992 ntBASIC12.17□□□□□ -0.46
Usp8Q80U87 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usp8Q80U87 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.17□□□□□ -0.46
Usp8Q80U87 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Usp8Q80U87 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usp8Q80U87 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.17□□□□□ -0.46
Usp8Q80U87 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp8Q80U87 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Usp8Q80U87 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Usp8Q80U87 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp8Q80U87 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp8Q80U87 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp8Q80U87 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp8Q80U87 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.17□□□□□ -0.46
Usp8Q80U87 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp8Q80U87 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usp8Q80U87 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.17□□□□□ -0.46
Usp8Q80U87 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.17□□□□□ -0.46
Usp8Q80U87 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp8Q80U87 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usp8Q80U87 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp8Q80U87 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usp8Q80U87 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp8Q80U87 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp8Q80U87 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp8Q80U87 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usp8Q80U87 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Usp8Q80U87 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp8Q80U87 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp8Q80U87 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp8Q80U87 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usp8Q80U87 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp8Q80U87 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usp8Q80U87 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.16□□□□□ -0.46
Usp8Q80U87 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.16□□□□□ -0.46
Usp8Q80U87 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.16□□□□□ -0.46
Usp8Q80U87 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Usp8Q80U87 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp8Q80U87 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usp8Q80U87 Gm15824-201ENSMUST00000119516 955 ntBASIC12.16□□□□□ -0.46
Usp8Q80U87 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.16□□□□□ -0.46
Usp8Q80U87 Gm23119-201ENSMUST00000158610 140 ntBASIC12.16□□□□□ -0.46
Usp8Q80U87 Gm24548-201ENSMUST00000158650 108 ntBASIC12.16□□□□□ -0.46
Usp8Q80U87 Gm44405-201ENSMUST00000198952 126 ntBASIC12.16□□□□□ -0.46
Usp8Q80U87 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.16□□□□□ -0.46
Usp8Q80U87 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.16□□□□□ -0.46
Usp8Q80U87 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Usp8Q80U87 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Usp8Q80U87 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usp8Q80U87 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.16□□□□□ -0.46
Usp8Q80U87 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.16□□□□□ -0.46
Usp8Q80U87 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usp8Q80U87 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp8Q80U87 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp8Q80U87 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp8Q80U87 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp8Q80U87 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp8Q80U87 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.16□□□□□ -0.46
Usp8Q80U87 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp8Q80U87 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp8Q80U87 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp8Q80U87 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp8Q80U87 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Usp8Q80U87 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp8Q80U87 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp8Q80U87 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp8Q80U87 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.16□□□□□ -0.46
Usp8Q80U87 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.15□□□□□ -0.46
Usp8Q80U87 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp8Q80U87 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Usp8Q80U87 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Usp8Q80U87 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp8Q80U87 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp8Q80U87 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.15□□□□□ -0.46
Usp8Q80U87 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp8Q80U87 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Usp8Q80U87 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Usp8Q80U87 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Usp8Q80U87 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp8Q80U87 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms