Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh19Q80TF3 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 AU022133-201ENSMUST00000200601 873 ntBASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Gm4157-201ENSMUST00000211647 679 ntBASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Gm270-201ENSMUST00000223010 976 ntBASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh19Q80TF3 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdh19Q80TF3 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdh19Q80TF3 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdh19Q80TF3 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Pcdh19Q80TF3 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdh19Q80TF3 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.89□□□□□ -0.51
Pcdh19Q80TF3 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh19Q80TF3 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh19Q80TF3 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pcdh19Q80TF3 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh19Q80TF3 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh19Q80TF3 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Pcdh19Q80TF3 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh19Q80TF3 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh19Q80TF3 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh19Q80TF3 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh19Q80TF3 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.89□□□□□ -0.51
Pcdh19Q80TF3 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.89□□□□□ -0.51
Pcdh19Q80TF3 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms