Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rtl1Q7M732 Arhgef3-204ENSMUST00000225949 3198 ntBASIC21.3■■□□□ 1
Rtl1Q7M732 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
Rtl1Q7M732 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Rtl1Q7M732 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Rtl1Q7M732 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
Rtl1Q7M732 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rtl1Q7M732 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC21.3■■□□□ 1
Rtl1Q7M732 Gm45550-201ENSMUST00000209380 946 ntBASIC21.3■■□□□ 1
Rtl1Q7M732 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC21.3■■□□□ 1
Rtl1Q7M732 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Rtl1Q7M732 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rtl1Q7M732 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Rtl1Q7M732 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rtl1Q7M732 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC21.3■■□□□ 1
Rtl1Q7M732 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rtl1Q7M732 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rtl1Q7M732 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC21.3■■□□□ 1
Rtl1Q7M732 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rtl1Q7M732 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rtl1Q7M732 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rtl1Q7M732 CT025624.1-201ENSMUST00000224007 2700 ntBASIC21.3■■□□□ 1
Rtl1Q7M732 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Rtl1Q7M732 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Rtl1Q7M732 Gm37348-201ENSMUST00000193104 1789 ntBASIC21.3■■□□□ 1
Rtl1Q7M732 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rtl1Q7M732 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Rtl1Q7M732 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rtl1Q7M732 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rtl1Q7M732 Gm22920-201ENSMUST00000102175 109 ntBASIC21.29■■□□□ 1
Rtl1Q7M732 Gm25076-201ENSMUST00000104098 132 ntBASIC21.29■■□□□ 1
Rtl1Q7M732 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC21.29■■□□□ 1
Rtl1Q7M732 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rtl1Q7M732 Gm18367-201ENSMUST00000176139 600 ntBASIC21.29■■□□□ 1
Rtl1Q7M732 Gm42997-202ENSMUST00000200321 985 ntBASIC21.29■■□□□ 1
Rtl1Q7M732 Gm6450-201ENSMUST00000200896 574 ntBASIC21.29■■□□□ 1
Rtl1Q7M732 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC21.29■■□□□ 1
Rtl1Q7M732 Gm8420-201ENSMUST00000097103 598 ntBASIC21.29■■□□□ 1
Rtl1Q7M732 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rtl1Q7M732 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Rtl1Q7M732 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC21.29■■□□□ 1
Rtl1Q7M732 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rtl1Q7M732 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Rtl1Q7M732 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rtl1Q7M732 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rtl1Q7M732 Gm12856-201ENSMUST00000119471 1293 ntBASIC21.29■■□□□ 1
Rtl1Q7M732 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC21.29■■□□□ 1
Rtl1Q7M732 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rtl1Q7M732 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rtl1Q7M732 Gm9463-201ENSMUST00000206707 601 ntBASIC21.29■■□□□ 1
Rtl1Q7M732 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Rtl1Q7M732 CT485607.1-201ENSMUST00000216100 85 ntBASIC21.29■■□□□ 1
Rtl1Q7M732 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rtl1Q7M732 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Rtl1Q7M732 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rtl1Q7M732 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Rtl1Q7M732 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Rtl1Q7M732 Gm8146-201ENSMUST00000192106 1847 ntBASIC21.29■■□□□ 1
Rtl1Q7M732 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rtl1Q7M732 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
Rtl1Q7M732 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Rtl1Q7M732 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtl1Q7M732 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Rtl1Q7M732 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtl1Q7M732 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Rtl1Q7M732 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtl1Q7M732 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC21.28■■□□□ 1
Rtl1Q7M732 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC21.28■■□□□ 1
Rtl1Q7M732 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rtl1Q7M732 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Rtl1Q7M732 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rtl1Q7M732 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Rtl1Q7M732 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rtl1Q7M732 Gm12029-201ENSMUST00000120073 832 ntBASIC21.28■■□□□ 1
Rtl1Q7M732 Gm7940-201ENSMUST00000218195 769 ntBASIC21.28■■□□□ 1
Rtl1Q7M732 Gm9279-201ENSMUST00000223175 1606 ntBASIC21.28■■□□□ 1
Rtl1Q7M732 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtl1Q7M732 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC21.28■■□□□ 1
Rtl1Q7M732 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rtl1Q7M732 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
Rtl1Q7M732 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtl1Q7M732 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Rtl1Q7M732 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Rtl1Q7M732 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
Rtl1Q7M732 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rtl1Q7M732 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rtl1Q7M732 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Rtl1Q7M732 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Rtl1Q7M732 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rtl1Q7M732 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rtl1Q7M732 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC21.27■■□□□ 1
Rtl1Q7M732 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Rtl1Q7M732 Mir7032-201ENSMUST00000185154 79 ntBASIC21.27■■□□□ 1
Rtl1Q7M732 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Rtl1Q7M732 Ighv5-11-201ENSMUST00000193354 371 ntBASIC21.27■■□□□ 1
Rtl1Q7M732 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC21.27■■□□□ 1
Rtl1Q7M732 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC21.27■■□□□ 1
Rtl1Q7M732 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Rtl1Q7M732 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rtl1Q7M732 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms