Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Gm5455-201ENSMUST00000058710 715 ntBASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nudcd1Q6PIP5 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nudcd1Q6PIP5 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms