Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Gm13736-201ENSMUST00000119272 253 ntBASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Gm10076-201ENSMUST00000073238 384 ntBASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.1□□□□□ -0.63
Smarcd3Q6P9Z1 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Gm4984-201ENSMUST00000115987 360 ntBASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Gm13829-201ENSMUST00000119600 138 ntBASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Gm40466-201ENSMUST00000212174 422 ntBASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd3Q6P9Z1 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms