Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.44
Casc4Q6P2L7 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Casc4Q6P2L7 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Casc4Q6P2L7 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.27□□□□□ -0.44
Casc4Q6P2L7 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.27□□□□□ -0.44
Casc4Q6P2L7 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Casc4Q6P2L7 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.27□□□□□ -0.44
Casc4Q6P2L7 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.44
Casc4Q6P2L7 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Casc4Q6P2L7 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Casc4Q6P2L7 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Casc4Q6P2L7 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Casc4Q6P2L7 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Casc4Q6P2L7 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Casc4Q6P2L7 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Casc4Q6P2L7 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Casc4Q6P2L7 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.27□□□□□ -0.44
Casc4Q6P2L7 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Casc4Q6P2L7 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Casc4Q6P2L7 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Casc4Q6P2L7 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Casc4Q6P2L7 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Casc4Q6P2L7 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Casc4Q6P2L7 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Casc4Q6P2L7 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.27□□□□□ -0.45
Casc4Q6P2L7 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Casc4Q6P2L7 Gm15276-201ENSMUST00000145953 498 ntBASIC12.27□□□□□ -0.45
Casc4Q6P2L7 Gm26083-201ENSMUST00000157904 193 ntBASIC12.27□□□□□ -0.45
Casc4Q6P2L7 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.27□□□□□ -0.45
Casc4Q6P2L7 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.27□□□□□ -0.45
Casc4Q6P2L7 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.27□□□□□ -0.45
Casc4Q6P2L7 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Casc4Q6P2L7 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Casc4Q6P2L7 Gm44882-201ENSMUST00000205702 802 ntBASIC12.27□□□□□ -0.45
Casc4Q6P2L7 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.27□□□□□ -0.45
Casc4Q6P2L7 Gm9996-201ENSMUST00000070359 913 ntBASIC12.27□□□□□ -0.45
Casc4Q6P2L7 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Casc4Q6P2L7 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Casc4Q6P2L7 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Casc4Q6P2L7 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Casc4Q6P2L7 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Casc4Q6P2L7 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Casc4Q6P2L7 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Casc4Q6P2L7 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Casc4Q6P2L7 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Casc4Q6P2L7 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Casc4Q6P2L7 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Casc4Q6P2L7 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Casc4Q6P2L7 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Casc4Q6P2L7 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.27□□□□□ -0.45
Casc4Q6P2L7 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Casc4Q6P2L7 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Casc4Q6P2L7 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Casc4Q6P2L7 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Casc4Q6P2L7 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Casc4Q6P2L7 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Casc4Q6P2L7 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.26□□□□□ -0.45
Casc4Q6P2L7 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Casc4Q6P2L7 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Casc4Q6P2L7 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Casc4Q6P2L7 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Casc4Q6P2L7 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.26□□□□□ -0.45
Casc4Q6P2L7 Gm12015-201ENSMUST00000117065 843 ntBASIC12.26□□□□□ -0.45
Casc4Q6P2L7 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Casc4Q6P2L7 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Casc4Q6P2L7 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.26□□□□□ -0.45
Casc4Q6P2L7 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Casc4Q6P2L7 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.26□□□□□ -0.45
Casc4Q6P2L7 Gm42599-201ENSMUST00000201308 469 ntBASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms