Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Slx4Q6P1D7 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC18.3■□□□□ 0.52
Slx4Q6P1D7 Gm25492-201ENSMUST00000157383 129 ntBASIC18.3■□□□□ 0.52
Slx4Q6P1D7 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Slx4Q6P1D7 Gm43671-201ENSMUST00000200422 433 ntBASIC18.3■□□□□ 0.52
Slx4Q6P1D7 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slx4Q6P1D7 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slx4Q6P1D7 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slx4Q6P1D7 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Slx4Q6P1D7 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Slx4Q6P1D7 Gm13347-201ENSMUST00000120298 1353 ntBASIC18.3■□□□□ 0.52
Slx4Q6P1D7 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Slx4Q6P1D7 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slx4Q6P1D7 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slx4Q6P1D7 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Slx4Q6P1D7 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slx4Q6P1D7 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slx4Q6P1D7 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Slx4Q6P1D7 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC18.3■□□□□ 0.52
Slx4Q6P1D7 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slx4Q6P1D7 Gm14132-201ENSMUST00000117188 1719 ntBASIC18.3■□□□□ 0.52
Slx4Q6P1D7 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Slx4Q6P1D7 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Slx4Q6P1D7 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slx4Q6P1D7 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slx4Q6P1D7 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slx4Q6P1D7 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Slx4Q6P1D7 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Slx4Q6P1D7 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Slx4Q6P1D7 Mir6941-201ENSMUST00000184711 59 ntBASIC18.3■□□□□ 0.52
Slx4Q6P1D7 Gm43275-201ENSMUST00000202053 1020 ntBASIC18.3■□□□□ 0.52
Slx4Q6P1D7 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC18.3■□□□□ 0.52
Slx4Q6P1D7 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC18.3■□□□□ 0.52
Slx4Q6P1D7 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slx4Q6P1D7 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slx4Q6P1D7 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slx4Q6P1D7 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slx4Q6P1D7 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slx4Q6P1D7 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Slx4Q6P1D7 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Slx4Q6P1D7 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC18.29■□□□□ 0.52
Slx4Q6P1D7 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slx4Q6P1D7 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Slx4Q6P1D7 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slx4Q6P1D7 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slx4Q6P1D7 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Slx4Q6P1D7 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slx4Q6P1D7 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Slx4Q6P1D7 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slx4Q6P1D7 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC18.29■□□□□ 0.52
Slx4Q6P1D7 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slx4Q6P1D7 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slx4Q6P1D7 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slx4Q6P1D7 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Slx4Q6P1D7 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Slx4Q6P1D7 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Slx4Q6P1D7 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Slx4Q6P1D7 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC18.29■□□□□ 0.52
Slx4Q6P1D7 Gm34379-201ENSMUST00000195036 290 ntBASIC18.29■□□□□ 0.52
Slx4Q6P1D7 Ighv1-60-201ENSMUST00000195816 405 ntBASIC18.29■□□□□ 0.52
Slx4Q6P1D7 AC158392.3-201ENSMUST00000224271 1284 ntBASIC18.29■□□□□ 0.52
Slx4Q6P1D7 AC138716.2-201ENSMUST00000226670 1016 ntBASIC18.29■□□□□ 0.52
Slx4Q6P1D7 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slx4Q6P1D7 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC18.29■□□□□ 0.52
Slx4Q6P1D7 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Slx4Q6P1D7 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slx4Q6P1D7 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slx4Q6P1D7 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Slx4Q6P1D7 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slx4Q6P1D7 Gm9796-201ENSMUST00000062249 2250 ntBASIC18.28■□□□□ 0.52
Slx4Q6P1D7 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slx4Q6P1D7 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slx4Q6P1D7 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Slx4Q6P1D7 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Slx4Q6P1D7 Gm42748-201ENSMUST00000199354 2341 ntBASIC18.28■□□□□ 0.52
Slx4Q6P1D7 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slx4Q6P1D7 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slx4Q6P1D7 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slx4Q6P1D7 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slx4Q6P1D7 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Slx4Q6P1D7 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slx4Q6P1D7 Gm12712-201ENSMUST00000120676 801 ntBASIC18.28■□□□□ 0.52
Slx4Q6P1D7 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC18.28■□□□□ 0.52
Slx4Q6P1D7 Mir8093-201ENSMUST00000185043 137 ntBASIC18.28■□□□□ 0.52
Slx4Q6P1D7 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Slx4Q6P1D7 AC134869.4-202ENSMUST00000224350 837 ntBASIC18.28■□□□□ 0.52
Slx4Q6P1D7 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slx4Q6P1D7 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Slx4Q6P1D7 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slx4Q6P1D7 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slx4Q6P1D7 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slx4Q6P1D7 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Slx4Q6P1D7 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Slx4Q6P1D7 Gm6831-202ENSMUST00000213025 1673 ntBASIC18.28■□□□□ 0.52
Slx4Q6P1D7 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slx4Q6P1D7 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slx4Q6P1D7 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Slx4Q6P1D7 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slx4Q6P1D7 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Slx4Q6P1D7 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms