Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.27□□□□□ -0.44
Sp140Q6NSQ5 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.27□□□□□ -0.44
Sp140Q6NSQ5 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.27□□□□□ -0.44
Sp140Q6NSQ5 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Sp140Q6NSQ5 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sp140Q6NSQ5 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sp140Q6NSQ5 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Sp140Q6NSQ5 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sp140Q6NSQ5 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Sp140Q6NSQ5 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sp140Q6NSQ5 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.27□□□□□ -0.45
Sp140Q6NSQ5 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Sp140Q6NSQ5 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sp140Q6NSQ5 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.27□□□□□ -0.45
Sp140Q6NSQ5 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sp140Q6NSQ5 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sp140Q6NSQ5 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sp140Q6NSQ5 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.27□□□□□ -0.45
Sp140Q6NSQ5 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sp140Q6NSQ5 Gm27516-201ENSMUST00000184237 98 ntBASIC12.27□□□□□ -0.45
Sp140Q6NSQ5 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.27□□□□□ -0.45
Sp140Q6NSQ5 Gm6621-201ENSMUST00000193251 772 ntBASIC12.27□□□□□ -0.45
Sp140Q6NSQ5 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.27□□□□□ -0.45
Sp140Q6NSQ5 Gm18711-201ENSMUST00000199341 750 ntBASIC12.27□□□□□ -0.45
Sp140Q6NSQ5 Gm6334-201ENSMUST00000207083 228 ntBASIC12.27□□□□□ -0.45
Sp140Q6NSQ5 Gm30285-201ENSMUST00000214614 422 ntBASIC12.27□□□□□ -0.45
Sp140Q6NSQ5 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.27□□□□□ -0.45
Sp140Q6NSQ5 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.27□□□□□ -0.45
Sp140Q6NSQ5 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.27□□□□□ -0.45
Sp140Q6NSQ5 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.27□□□□□ -0.45
Sp140Q6NSQ5 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sp140Q6NSQ5 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.27□□□□□ -0.45
Sp140Q6NSQ5 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sp140Q6NSQ5 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sp140Q6NSQ5 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sp140Q6NSQ5 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sp140Q6NSQ5 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sp140Q6NSQ5 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sp140Q6NSQ5 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.27□□□□□ -0.45
Sp140Q6NSQ5 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sp140Q6NSQ5 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sp140Q6NSQ5 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sp140Q6NSQ5 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sp140Q6NSQ5 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sp140Q6NSQ5 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Sp140Q6NSQ5 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sp140Q6NSQ5 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Sp140Q6NSQ5 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms