Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Krt39Q6IFX4 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Krt39Q6IFX4 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Krt39Q6IFX4 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Krt39Q6IFX4 Gm17420-201ENSMUST00000164753 153 ntBASIC13.37□□□□□ -0.27
Krt39Q6IFX4 Gm27514-201ENSMUST00000183692 110 ntBASIC13.37□□□□□ -0.27
Krt39Q6IFX4 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Krt39Q6IFX4 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Krt39Q6IFX4 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Krt39Q6IFX4 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Krt39Q6IFX4 Snora73a-201ENSMUST00000082453 205 ntBASIC13.37□□□□□ -0.27
Krt39Q6IFX4 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Krt39Q6IFX4 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Krt39Q6IFX4 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Krt39Q6IFX4 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Krt39Q6IFX4 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Krt39Q6IFX4 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Krt39Q6IFX4 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Krt39Q6IFX4 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Krt39Q6IFX4 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Krt39Q6IFX4 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Krt39Q6IFX4 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Krt39Q6IFX4 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Krt39Q6IFX4 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Krt39Q6IFX4 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Krt39Q6IFX4 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Krt39Q6IFX4 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Krt39Q6IFX4 Gm5187-201ENSMUST00000117317 991 ntBASIC13.36□□□□□ -0.27
Krt39Q6IFX4 Gm12036-201ENSMUST00000120008 530 ntBASIC13.36□□□□□ -0.27
Krt39Q6IFX4 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Krt39Q6IFX4 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Krt39Q6IFX4 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Krt39Q6IFX4 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.36□□□□□ -0.27
Krt39Q6IFX4 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Krt39Q6IFX4 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.36□□□□□ -0.27
Krt39Q6IFX4 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Krt39Q6IFX4 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.36□□□□□ -0.27
Krt39Q6IFX4 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.36□□□□□ -0.27
Krt39Q6IFX4 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Krt39Q6IFX4 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Krt39Q6IFX4 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Krt39Q6IFX4 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Krt39Q6IFX4 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Krt39Q6IFX4 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Krt39Q6IFX4 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Krt39Q6IFX4 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Krt39Q6IFX4 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Krt39Q6IFX4 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Krt39Q6IFX4 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Krt39Q6IFX4 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Krt39Q6IFX4 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Krt39Q6IFX4 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Krt39Q6IFX4 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Krt39Q6IFX4 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Krt39Q6IFX4 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Krt39Q6IFX4 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Krt39Q6IFX4 Gm2128-201ENSMUST00000108009 2560 ntBASIC13.35□□□□□ -0.27
Krt39Q6IFX4 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Krt39Q6IFX4 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Krt39Q6IFX4 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Krt39Q6IFX4 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Krt39Q6IFX4 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Krt39Q6IFX4 Gm38194-201ENSMUST00000194529 2211 ntBASIC13.35□□□□□ -0.27
Krt39Q6IFX4 AC124397.2-201ENSMUST00000225575 2215 ntBASIC13.35□□□□□ -0.27
Krt39Q6IFX4 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Krt39Q6IFX4 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Krt39Q6IFX4 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.35□□□□□ -0.27
Krt39Q6IFX4 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Krt39Q6IFX4 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Krt39Q6IFX4 Gm17230-201ENSMUST00000171194 3942 ntBASIC13.35□□□□□ -0.27
Krt39Q6IFX4 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Krt39Q6IFX4 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Krt39Q6IFX4 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Krt39Q6IFX4 Gm24934-201ENSMUST00000103764 111 ntBASIC13.35□□□□□ -0.27
Krt39Q6IFX4 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Krt39Q6IFX4 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Krt39Q6IFX4 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Krt39Q6IFX4 Gm13570-201ENSMUST00000140763 309 ntBASIC13.35□□□□□ -0.27
Krt39Q6IFX4 Gm24548-201ENSMUST00000158650 108 ntBASIC13.35□□□□□ -0.27
Krt39Q6IFX4 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Krt39Q6IFX4 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Krt39Q6IFX4 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.35□□□□□ -0.27
Krt39Q6IFX4 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.35□□□□□ -0.27
Krt39Q6IFX4 Gm37008-201ENSMUST00000195712 319 ntBASIC13.35□□□□□ -0.27
Krt39Q6IFX4 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.35□□□□□ -0.27
Krt39Q6IFX4 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Krt39Q6IFX4 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Krt39Q6IFX4 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Krt39Q6IFX4 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Krt39Q6IFX4 Gm37131-201ENSMUST00000192502 1561 ntBASIC13.35□□□□□ -0.27
Krt39Q6IFX4 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
Krt39Q6IFX4 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Krt39Q6IFX4 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Krt39Q6IFX4 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Krt39Q6IFX4 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Krt39Q6IFX4 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.35□□□□□ -0.27
Krt39Q6IFX4 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Krt39Q6IFX4 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Krt39Q6IFX4 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Krt39Q6IFX4 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms