Protein–RNA interactions for Protein: Q6DIC0

Smarca2, Probable global transcription activator SNF2L2, mousemouse

Predictions only

Length 1,577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2Q6DIC0 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smarca2Q6DIC0 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Smarca2Q6DIC0 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC20.67■□□□□ 0.9
Smarca2Q6DIC0 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smarca2Q6DIC0 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Smarca2Q6DIC0 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarca2Q6DIC0 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarca2Q6DIC0 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarca2Q6DIC0 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarca2Q6DIC0 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarca2Q6DIC0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarca2Q6DIC0 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarca2Q6DIC0 Acot6-202ENSMUST00000222921 3622 ntBASIC20.66■□□□□ 0.9
Smarca2Q6DIC0 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Smarca2Q6DIC0 Gm25562-201ENSMUST00000104608 133 ntBASIC20.66■□□□□ 0.9
Smarca2Q6DIC0 Gm12389-201ENSMUST00000117696 418 ntBASIC20.66■□□□□ 0.9
Smarca2Q6DIC0 Mir432-201ENSMUST00000157230 75 ntBASIC20.66■□□□□ 0.9
Smarca2Q6DIC0 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Smarca2Q6DIC0 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Smarca2Q6DIC0 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Smarca2Q6DIC0 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC20.66■□□□□ 0.9
Smarca2Q6DIC0 AC162932.1-201ENSMUST00000219209 872 ntBASIC20.66■□□□□ 0.9
Smarca2Q6DIC0 AC142266.1-201ENSMUST00000228107 415 ntBASIC20.66■□□□□ 0.9
Smarca2Q6DIC0 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Smarca2Q6DIC0 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarca2Q6DIC0 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarca2Q6DIC0 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarca2Q6DIC0 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarca2Q6DIC0 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Smarca2Q6DIC0 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarca2Q6DIC0 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarca2Q6DIC0 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarca2Q6DIC0 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Smarca2Q6DIC0 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC20.65■□□□□ 0.9
Smarca2Q6DIC0 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC20.65■□□□□ 0.9
Smarca2Q6DIC0 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smarca2Q6DIC0 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Smarca2Q6DIC0 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smarca2Q6DIC0 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Smarca2Q6DIC0 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarca2Q6DIC0 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Smarca2Q6DIC0 Gm16219-201ENSMUST00000120096 274 ntBASIC20.65■□□□□ 0.9
Smarca2Q6DIC0 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC20.65■□□□□ 0.9
Smarca2Q6DIC0 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC20.65■□□□□ 0.9
Smarca2Q6DIC0 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC20.65■□□□□ 0.9
Smarca2Q6DIC0 Gm44323-201ENSMUST00000198689 129 ntBASIC20.65■□□□□ 0.9
Smarca2Q6DIC0 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC20.65■□□□□ 0.9
Smarca2Q6DIC0 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarca2Q6DIC0 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Smarca2Q6DIC0 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarca2Q6DIC0 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarca2Q6DIC0 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smarca2Q6DIC0 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarca2Q6DIC0 AC166574.4-201ENSMUST00000227165 1937 ntBASIC20.65■□□□□ 0.9
Smarca2Q6DIC0 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarca2Q6DIC0 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smarca2Q6DIC0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarca2Q6DIC0 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smarca2Q6DIC0 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarca2Q6DIC0 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smarca2Q6DIC0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.64■□□□□ 0.9
Smarca2Q6DIC0 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC20.64■□□□□ 0.9
Smarca2Q6DIC0 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smarca2Q6DIC0 Gm16459-201ENSMUST00000121443 686 ntBASIC20.64■□□□□ 0.9
Smarca2Q6DIC0 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smarca2Q6DIC0 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Smarca2Q6DIC0 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Smarca2Q6DIC0 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smarca2Q6DIC0 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC20.64■□□□□ 0.9
Smarca2Q6DIC0 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Smarca2Q6DIC0 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Smarca2Q6DIC0 Gm9162-201ENSMUST00000182081 991 ntBASIC20.64■□□□□ 0.9
Smarca2Q6DIC0 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smarca2Q6DIC0 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smarca2Q6DIC0 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smarca2Q6DIC0 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smarca2Q6DIC0 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smarca2Q6DIC0 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smarca2Q6DIC0 Gm38391-201ENSMUST00000191720 4069 ntBASIC20.64■□□□□ 0.89
Smarca2Q6DIC0 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smarca2Q6DIC0 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smarca2Q6DIC0 Shroom3-211ENSMUST00000225438 5742 ntBASIC20.64■□□□□ 0.89
Smarca2Q6DIC0 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smarca2Q6DIC0 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Smarca2Q6DIC0 Rnf17-202ENSMUST00000223627 2077 ntBASIC20.64■□□□□ 0.89
Smarca2Q6DIC0 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smarca2Q6DIC0 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Smarca2Q6DIC0 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
Smarca2Q6DIC0 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.89
Smarca2Q6DIC0 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smarca2Q6DIC0 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smarca2Q6DIC0 Gm26272-201ENSMUST00000179241 132 ntBASIC20.63■□□□□ 0.89
Smarca2Q6DIC0 Gm7627-201ENSMUST00000183205 999 ntBASIC20.63■□□□□ 0.89
Smarca2Q6DIC0 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC20.63■□□□□ 0.89
Smarca2Q6DIC0 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC20.63■□□□□ 0.89
Smarca2Q6DIC0 Gm7238-201ENSMUST00000206467 973 ntBASIC20.63■□□□□ 0.89
Smarca2Q6DIC0 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC20.63■□□□□ 0.89
Smarca2Q6DIC0 Gm6564-201ENSMUST00000075377 619 ntBASIC20.63■□□□□ 0.89
Smarca2Q6DIC0 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smarca2Q6DIC0 Gm37644-201ENSMUST00000192190 2270 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms