Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
VcanQ62059 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
VcanQ62059 Gm8459-201ENSMUST00000162504 760 ntBASIC11.03□□□□□ -0.64
VcanQ62059 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
VcanQ62059 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
VcanQ62059 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
VcanQ62059 Mir341-201ENSMUST00000093593 96 ntBASIC11.03□□□□□ -0.64
VcanQ62059 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
VcanQ62059 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
VcanQ62059 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
VcanQ62059 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
VcanQ62059 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
VcanQ62059 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
VcanQ62059 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
VcanQ62059 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.03□□□□□ -0.64
VcanQ62059 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
VcanQ62059 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
VcanQ62059 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.03□□□□□ -0.64
VcanQ62059 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC11.03□□□□□ -0.64
VcanQ62059 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
VcanQ62059 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
VcanQ62059 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
VcanQ62059 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
VcanQ62059 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.03□□□□□ -0.64
VcanQ62059 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.03□□□□□ -0.64
VcanQ62059 Erich3-203ENSMUST00000189969 3460 ntBASIC11.03□□□□□ -0.64
VcanQ62059 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
VcanQ62059 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.03□□□□□ -0.64
VcanQ62059 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
VcanQ62059 Smok4a-201ENSMUST00000074512 1455 ntBASIC11.03□□□□□ -0.64
VcanQ62059 Gm5419-201ENSMUST00000119301 527 ntBASIC11.03□□□□□ -0.64
VcanQ62059 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC11.03□□□□□ -0.64
VcanQ62059 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC11.03□□□□□ -0.64
VcanQ62059 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
VcanQ62059 Gm26272-201ENSMUST00000179241 132 ntBASIC11.03□□□□□ -0.64
VcanQ62059 Gm26976-201ENSMUST00000182929 908 ntBASIC11.03□□□□□ -0.64
VcanQ62059 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.03□□□□□ -0.64
VcanQ62059 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.03□□□□□ -0.64
VcanQ62059 AC103672.1-201ENSMUST00000227502 365 ntBASIC11.03□□□□□ -0.64
VcanQ62059 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
VcanQ62059 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
VcanQ62059 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
VcanQ62059 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
VcanQ62059 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
VcanQ62059 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
VcanQ62059 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
VcanQ62059 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
VcanQ62059 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
VcanQ62059 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
VcanQ62059 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
VcanQ62059 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
VcanQ62059 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
VcanQ62059 Mir705-201ENSMUST00000102058 82 ntBASIC11.02□□□□□ -0.64
VcanQ62059 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
VcanQ62059 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
VcanQ62059 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.02□□□□□ -0.64
VcanQ62059 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.02□□□□□ -0.64
VcanQ62059 AC124613.1-201ENSMUST00000198711 88 ntBASIC11.02□□□□□ -0.64
VcanQ62059 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.02□□□□□ -0.64
VcanQ62059 CT571271.1-201ENSMUST00000227071 670 ntBASIC11.02□□□□□ -0.64
VcanQ62059 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
VcanQ62059 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
VcanQ62059 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
VcanQ62059 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
VcanQ62059 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
VcanQ62059 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
VcanQ62059 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
VcanQ62059 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
VcanQ62059 Gm11540-201ENSMUST00000117457 780 ntBASIC11.02□□□□□ -0.65
VcanQ62059 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
VcanQ62059 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
VcanQ62059 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
VcanQ62059 Gm7727-201ENSMUST00000219830 671 ntBASIC11.02□□□□□ -0.65
VcanQ62059 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.02□□□□□ -0.65
VcanQ62059 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
VcanQ62059 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
VcanQ62059 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
VcanQ62059 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
VcanQ62059 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
VcanQ62059 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
VcanQ62059 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
VcanQ62059 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC11.02□□□□□ -0.65
VcanQ62059 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
VcanQ62059 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
VcanQ62059 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VcanQ62059 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
VcanQ62059 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VcanQ62059 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.01□□□□□ -0.65
VcanQ62059 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.01□□□□□ -0.65
VcanQ62059 Crygf-202ENSMUST00000114027 594 ntTSL 2 BASIC11.01□□□□□ -0.65
VcanQ62059 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VcanQ62059 Gm25830-201ENSMUST00000158923 132 ntBASIC11.01□□□□□ -0.65
VcanQ62059 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
VcanQ62059 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VcanQ62059 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC11.01□□□□□ -0.65
VcanQ62059 Gm9487-201ENSMUST00000216600 472 ntBASIC11.01□□□□□ -0.65
VcanQ62059 CT025689.1-201ENSMUST00000225214 283 ntBASIC11.01□□□□□ -0.65
VcanQ62059 Gm5292-201ENSMUST00000073317 580 ntBASIC11.01□□□□□ -0.65
VcanQ62059 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VcanQ62059 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms