Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.3□□□□□ -0.12
Ctr9Q62018 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC14.3□□□□□ -0.12
Ctr9Q62018 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.3□□□□□ -0.12
Ctr9Q62018 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ctr9Q62018 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ctr9Q62018 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ctr9Q62018 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.3□□□□□ -0.12
Ctr9Q62018 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ctr9Q62018 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC14.3□□□□□ -0.12
Ctr9Q62018 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ctr9Q62018 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ctr9Q62018 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ctr9Q62018 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ctr9Q62018 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ctr9Q62018 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ctr9Q62018 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ctr9Q62018 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ctr9Q62018 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Ctr9Q62018 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ctr9Q62018 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ctr9Q62018 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ctr9Q62018 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ctr9Q62018 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ctr9Q62018 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ctr9Q62018 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ctr9Q62018 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ctr9Q62018 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ctr9Q62018 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ctr9Q62018 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ctr9Q62018 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ctr9Q62018 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ctr9Q62018 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ctr9Q62018 Gm12266-201ENSMUST00000120311 962 ntBASIC14.29□□□□□ -0.12
Ctr9Q62018 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC14.29□□□□□ -0.12
Ctr9Q62018 B9d1os-201ENSMUST00000137010 674 ntBASIC14.29□□□□□ -0.12
Ctr9Q62018 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC14.29□□□□□ -0.12
Ctr9Q62018 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC14.29□□□□□ -0.12
Ctr9Q62018 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ctr9Q62018 Gm17827-201ENSMUST00000211825 742 ntBASIC14.29□□□□□ -0.12
Ctr9Q62018 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ctr9Q62018 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC14.29□□□□□ -0.12
Ctr9Q62018 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ctr9Q62018 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ctr9Q62018 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ctr9Q62018 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC14.29□□□□□ -0.12
Ctr9Q62018 AC171277.1-201ENSMUST00000216902 1441 ntBASIC14.29□□□□□ -0.12
Ctr9Q62018 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ctr9Q62018 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC14.29□□□□□ -0.12
Ctr9Q62018 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ctr9Q62018 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ctr9Q62018 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ctr9Q62018 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ctr9Q62018 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ctr9Q62018 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ctr9Q62018 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC14.29□□□□□ -0.12
Ctr9Q62018 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Ctr9Q62018 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ctr9Q62018 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ctr9Q62018 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ctr9Q62018 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ctr9Q62018 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ctr9Q62018 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctr9Q62018 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ctr9Q62018 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctr9Q62018 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctr9Q62018 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctr9Q62018 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ctr9Q62018 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctr9Q62018 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctr9Q62018 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Ctr9Q62018 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctr9Q62018 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctr9Q62018 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctr9Q62018 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ctr9Q62018 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ctr9Q62018 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctr9Q62018 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ctr9Q62018 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC14.28□□□□□ -0.12
Ctr9Q62018 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctr9Q62018 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ctr9Q62018 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctr9Q62018 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ctr9Q62018 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ctr9Q62018 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ctr9Q62018 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctr9Q62018 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctr9Q62018 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC14.28□□□□□ -0.12
Ctr9Q62018 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ctr9Q62018 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctr9Q62018 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ctr9Q62018 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctr9Q62018 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctr9Q62018 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctr9Q62018 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctr9Q62018 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ctr9Q62018 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ctr9Q62018 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ctr9Q62018 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Ctr9Q62018 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ctr9Q62018 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms