Protein–RNA interactions for Protein: Q61687

Atrx, Transcriptional regulator ATRX, mousemouse

Known RBP Predictions only

Length 2,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtrxQ61687 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
AtrxQ61687 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
AtrxQ61687 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
AtrxQ61687 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
AtrxQ61687 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.02□□□□□ -0.65
AtrxQ61687 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
AtrxQ61687 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
AtrxQ61687 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
AtrxQ61687 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.02□□□□□ -0.65
AtrxQ61687 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
AtrxQ61687 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
AtrxQ61687 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.02□□□□□ -0.65
AtrxQ61687 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
AtrxQ61687 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
AtrxQ61687 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
AtrxQ61687 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
AtrxQ61687 Mir6407-201ENSMUST00000184510 101 ntBASIC11.02□□□□□ -0.65
AtrxQ61687 Gm2345-201ENSMUST00000193451 589 ntBASIC11.02□□□□□ -0.65
AtrxQ61687 Gm44814-201ENSMUST00000207018 434 ntBASIC11.02□□□□□ -0.65
AtrxQ61687 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
AtrxQ61687 Gm6390-201ENSMUST00000215034 589 ntBASIC11.02□□□□□ -0.65
AtrxQ61687 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
AtrxQ61687 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
AtrxQ61687 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
AtrxQ61687 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
AtrxQ61687 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
AtrxQ61687 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
AtrxQ61687 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
AtrxQ61687 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
AtrxQ61687 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.02□□□□□ -0.65
AtrxQ61687 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
AtrxQ61687 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC11.02□□□□□ -0.65
AtrxQ61687 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
AtrxQ61687 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.02□□□□□ -0.65
AtrxQ61687 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
AtrxQ61687 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
AtrxQ61687 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
AtrxQ61687 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
AtrxQ61687 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
AtrxQ61687 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
AtrxQ61687 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
AtrxQ61687 Gm12712-201ENSMUST00000120676 801 ntBASIC11.01□□□□□ -0.65
AtrxQ61687 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
AtrxQ61687 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
AtrxQ61687 Gm43184-201ENSMUST00000197247 542 ntBASIC11.01□□□□□ -0.65
AtrxQ61687 Gm18123-201ENSMUST00000210874 822 ntBASIC11.01□□□□□ -0.65
AtrxQ61687 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
AtrxQ61687 Gm5805-201ENSMUST00000072779 456 ntBASIC11.01□□□□□ -0.65
AtrxQ61687 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.01□□□□□ -0.65
AtrxQ61687 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
AtrxQ61687 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
AtrxQ61687 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
AtrxQ61687 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
AtrxQ61687 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.01□□□□□ -0.65
AtrxQ61687 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
AtrxQ61687 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
AtrxQ61687 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
AtrxQ61687 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
AtrxQ61687 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.01□□□□□ -0.65
AtrxQ61687 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
AtrxQ61687 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
AtrxQ61687 Gm23062-201ENSMUST00000102349 110 ntBASIC11.01□□□□□ -0.65
AtrxQ61687 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC11.01□□□□□ -0.65
AtrxQ61687 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.01□□□□□ -0.65
AtrxQ61687 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
AtrxQ61687 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.01□□□□□ -0.65
AtrxQ61687 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
AtrxQ61687 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
AtrxQ61687 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
AtrxQ61687 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
AtrxQ61687 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.01□□□□□ -0.65
AtrxQ61687 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
AtrxQ61687 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
AtrxQ61687 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
AtrxQ61687 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
AtrxQ61687 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
AtrxQ61687 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11□□□□□ -0.65
AtrxQ61687 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
AtrxQ61687 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
AtrxQ61687 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
AtrxQ61687 Gm22133-201ENSMUST00000102082 109 ntBASIC11□□□□□ -0.65
AtrxQ61687 Gm12470-201ENSMUST00000117239 1049 ntBASIC11□□□□□ -0.65
AtrxQ61687 Gm37852-201ENSMUST00000193027 350 ntBASIC11□□□□□ -0.65
AtrxQ61687 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11□□□□□ -0.65
AtrxQ61687 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC11□□□□□ -0.65
AtrxQ61687 AC136376.2-201ENSMUST00000228819 490 ntBASIC11□□□□□ -0.65
AtrxQ61687 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
AtrxQ61687 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC11□□□□□ -0.65
AtrxQ61687 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
AtrxQ61687 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
AtrxQ61687 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
AtrxQ61687 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
AtrxQ61687 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
AtrxQ61687 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11□□□□□ -0.65
AtrxQ61687 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11□□□□□ -0.65
AtrxQ61687 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
AtrxQ61687 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
AtrxQ61687 Gm45342-201ENSMUST00000210903 1363 ntBASIC11□□□□□ -0.65
AtrxQ61687 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
AtrxQ61687 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms