Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Gm7238-201ENSMUST00000206467 973 ntBASIC13.28□□□□□ -0.28
Col11a1Q61245 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC13.28□□□□□ -0.28
Col11a1Q61245 Capsl-202ENSMUST00000226688 739 ntBASIC13.28□□□□□ -0.28
Col11a1Q61245 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Col11a1Q61245 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Col11a1Q61245 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col11a1Q61245 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Col11a1Q61245 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col11a1Q61245 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col11a1Q61245 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col11a1Q61245 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col11a1Q61245 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Col11a1Q61245 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col11a1Q61245 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col11a1Q61245 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.28□□□□□ -0.28
Col11a1Q61245 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col11a1Q61245 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col11a1Q61245 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col11a1Q61245 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col11a1Q61245 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Col11a1Q61245 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.27□□□□□ -0.28
Col11a1Q61245 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.28
Col11a1Q61245 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col11a1Q61245 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC13.27□□□□□ -0.28
Col11a1Q61245 Gm5909-201ENSMUST00000119768 1281 ntBASIC13.27□□□□□ -0.28
Col11a1Q61245 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC13.27□□□□□ -0.28
Col11a1Q61245 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC13.27□□□□□ -0.28
Col11a1Q61245 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Col11a1Q61245 Gm25830-201ENSMUST00000158923 132 ntBASIC13.27□□□□□ -0.28
Col11a1Q61245 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC13.27□□□□□ -0.28
Col11a1Q61245 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC13.27□□□□□ -0.28
Col11a1Q61245 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Col11a1Q61245 Mir7035-201ENSMUST00000184713 82 ntBASIC13.27□□□□□ -0.28
Col11a1Q61245 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.27□□□□□ -0.28
Col11a1Q61245 Gm37197-201ENSMUST00000195607 401 ntBASIC13.27□□□□□ -0.28
Col11a1Q61245 AC134248.1-201ENSMUST00000216113 1176 ntBASIC13.27□□□□□ -0.28
Col11a1Q61245 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col11a1Q61245 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col11a1Q61245 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col11a1Q61245 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col11a1Q61245 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col11a1Q61245 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.27□□□□□ -0.28
Col11a1Q61245 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col11a1Q61245 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col11a1Q61245 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col11a1Q61245 Gm44106-201ENSMUST00000203153 1599 ntBASIC13.27□□□□□ -0.29
Col11a1Q61245 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col11a1Q61245 Gm4294-201ENSMUST00000105169 614 ntBASIC13.27□□□□□ -0.29
Col11a1Q61245 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col11a1Q61245 Gm8111-201ENSMUST00000117659 987 ntBASIC13.27□□□□□ -0.29
Col11a1Q61245 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col11a1Q61245 Gm25569-201ENSMUST00000157175 131 ntBASIC13.27□□□□□ -0.29
Col11a1Q61245 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC13.27□□□□□ -0.29
Col11a1Q61245 Gm43163-201ENSMUST00000196571 442 ntBASIC13.27□□□□□ -0.29
Col11a1Q61245 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col11a1Q61245 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC13.27□□□□□ -0.29
Col11a1Q61245 AC138716.2-201ENSMUST00000226670 1016 ntBASIC13.27□□□□□ -0.29
Col11a1Q61245 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col11a1Q61245 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col11a1Q61245 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col11a1Q61245 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col11a1Q61245 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col11a1Q61245 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col11a1Q61245 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.26□□□□□ -0.29
Col11a1Q61245 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC13.26□□□□□ -0.29
Col11a1Q61245 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col11a1Q61245 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col11a1Q61245 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col11a1Q61245 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col11a1Q61245 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col11a1Q61245 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col11a1Q61245 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col11a1Q61245 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col11a1Q61245 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col11a1Q61245 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col11a1Q61245 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col11a1Q61245 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC13.26□□□□□ -0.29
Col11a1Q61245 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col11a1Q61245 Mir432-201ENSMUST00000157230 75 ntBASIC13.26□□□□□ -0.29
Col11a1Q61245 Gm24954-201ENSMUST00000178831 110 ntBASIC13.26□□□□□ -0.29
Col11a1Q61245 Ighv1-2-201ENSMUST00000195325 378 ntBASIC13.26□□□□□ -0.29
Col11a1Q61245 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC13.26□□□□□ -0.29
Col11a1Q61245 Gm7525-201ENSMUST00000219425 454 ntBASIC13.26□□□□□ -0.29
Col11a1Q61245 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC13.26□□□□□ -0.29
Col11a1Q61245 AC142266.1-201ENSMUST00000228107 415 ntBASIC13.26□□□□□ -0.29
Col11a1Q61245 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col11a1Q61245 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Col11a1Q61245 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col11a1Q61245 Gm6564-201ENSMUST00000075377 619 ntBASIC13.26□□□□□ -0.29
Col11a1Q61245 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col11a1Q61245 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col11a1Q61245 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col11a1Q61245 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.26□□□□□ -0.29
Col11a1Q61245 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col11a1Q61245 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col11a1Q61245 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.26□□□□□ -0.29
Col11a1Q61245 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col11a1Q61245 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col11a1Q61245 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col11a1Q61245 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms