Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.63□□□□□ -0.55
Col12a1Q60847 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col12a1Q60847 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
Col12a1Q60847 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col12a1Q60847 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.63□□□□□ -0.55
Col12a1Q60847 Gm25492-201ENSMUST00000157383 129 ntBASIC11.63□□□□□ -0.55
Col12a1Q60847 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Col12a1Q60847 Gm18256-201ENSMUST00000209087 907 ntBASIC11.63□□□□□ -0.55
Col12a1Q60847 Gm9487-201ENSMUST00000216600 472 ntBASIC11.63□□□□□ -0.55
Col12a1Q60847 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Col12a1Q60847 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col12a1Q60847 Gm17541-201ENSMUST00000080062 525 ntBASIC11.63□□□□□ -0.55
Col12a1Q60847 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col12a1Q60847 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col12a1Q60847 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col12a1Q60847 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Col12a1Q60847 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Col12a1Q60847 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Col12a1Q60847 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Col12a1Q60847 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.63□□□□□ -0.55
Col12a1Q60847 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col12a1Q60847 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.63□□□□□ -0.55
Col12a1Q60847 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col12a1Q60847 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Col12a1Q60847 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Col12a1Q60847 Gm14113-201ENSMUST00000121399 976 ntBASIC11.62□□□□□ -0.55
Col12a1Q60847 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col12a1Q60847 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC11.62□□□□□ -0.55
Col12a1Q60847 Gm43106-201ENSMUST00000199485 637 ntBASIC11.62□□□□□ -0.55
Col12a1Q60847 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.62□□□□□ -0.55
Col12a1Q60847 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Col12a1Q60847 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.62□□□□□ -0.55
Col12a1Q60847 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col12a1Q60847 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col12a1Q60847 Gm15626-201ENSMUST00000117478 868 ntBASIC11.62□□□□□ -0.55
Col12a1Q60847 Gm13281-201ENSMUST00000120871 567 ntBASIC11.62□□□□□ -0.55
Col12a1Q60847 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC11.62□□□□□ -0.55
Col12a1Q60847 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC11.62□□□□□ -0.55
Col12a1Q60847 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col12a1Q60847 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col12a1Q60847 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col12a1Q60847 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col12a1Q60847 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.62□□□□□ -0.55
Col12a1Q60847 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col12a1Q60847 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col12a1Q60847 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Col12a1Q60847 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col12a1Q60847 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Col12a1Q60847 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Col12a1Q60847 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col12a1Q60847 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col12a1Q60847 Gm42689-201ENSMUST00000202403 404 ntBASIC11.62□□□□□ -0.55
Col12a1Q60847 Gm43966-201ENSMUST00000203301 612 ntBASIC11.62□□□□□ -0.55
Col12a1Q60847 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col12a1Q60847 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC11.62□□□□□ -0.55
Col12a1Q60847 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col12a1Q60847 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col12a1Q60847 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Col12a1Q60847 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col12a1Q60847 Gm45124-201ENSMUST00000206723 2755 ntBASIC11.61□□□□□ -0.55
Col12a1Q60847 Gm13192-201ENSMUST00000101199 208 ntBASIC11.61□□□□□ -0.55
Col12a1Q60847 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Col12a1Q60847 Gm10443-201ENSMUST00000119024 210 ntBASIC11.61□□□□□ -0.55
Col12a1Q60847 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col12a1Q60847 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col12a1Q60847 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Col12a1Q60847 Gm20568-201ENSMUST00000197129 208 ntBASIC11.61□□□□□ -0.55
Col12a1Q60847 Gm17936-201ENSMUST00000199413 988 ntBASIC11.61□□□□□ -0.55
Col12a1Q60847 AC125409.3-201ENSMUST00000223488 653 ntBASIC11.61□□□□□ -0.55
Col12a1Q60847 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col12a1Q60847 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col12a1Q60847 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col12a1Q60847 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Col12a1Q60847 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col12a1Q60847 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col12a1Q60847 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col12a1Q60847 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col12a1Q60847 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col12a1Q60847 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col12a1Q60847 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Col12a1Q60847 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col12a1Q60847 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Col12a1Q60847 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Col12a1Q60847 Gm15136-201ENSMUST00000120552 533 ntBASIC11.61□□□□□ -0.55
Col12a1Q60847 Gm6612-201ENSMUST00000170777 395 ntBASIC11.61□□□□□ -0.55
Col12a1Q60847 Gm7572-201ENSMUST00000182616 766 ntBASIC11.61□□□□□ -0.55
Col12a1Q60847 Gm17931-201ENSMUST00000208132 634 ntBASIC11.61□□□□□ -0.55
Col12a1Q60847 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Col12a1Q60847 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC11.61□□□□□ -0.55
Col12a1Q60847 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Col12a1Q60847 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Col12a1Q60847 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col12a1Q60847 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col12a1Q60847 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col12a1Q60847 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col12a1Q60847 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col12a1Q60847 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.61□□□□□ -0.55
Col12a1Q60847 Gm43167-201ENSMUST00000202001 1606 ntBASIC11.6□□□□□ -0.55
Col12a1Q60847 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col12a1Q60847 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms