Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Satb1Q60611 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Satb1Q60611 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Satb1Q60611 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Satb1Q60611 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.65□□□□□ -0.38
Satb1Q60611 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Satb1Q60611 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Satb1Q60611 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Satb1Q60611 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Satb1Q60611 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.65□□□□□ -0.38
Satb1Q60611 Gm13600-201ENSMUST00000117949 744 ntBASIC12.65□□□□□ -0.38
Satb1Q60611 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Satb1Q60611 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Satb1Q60611 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Satb1Q60611 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Satb1Q60611 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Satb1Q60611 Gm5621-201ENSMUST00000187303 640 ntBASIC12.65□□□□□ -0.38
Satb1Q60611 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.65□□□□□ -0.38
Satb1Q60611 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.65□□□□□ -0.38
Satb1Q60611 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC12.65□□□□□ -0.38
Satb1Q60611 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Satb1Q60611 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.65□□□□□ -0.38
Satb1Q60611 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.65□□□□□ -0.38
Satb1Q60611 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Satb1Q60611 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Satb1Q60611 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Satb1Q60611 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Satb1Q60611 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Satb1Q60611 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Satb1Q60611 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Satb1Q60611 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Satb1Q60611 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Satb1Q60611 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Satb1Q60611 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Satb1Q60611 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.65□□□□□ -0.38
Satb1Q60611 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Satb1Q60611 Gm5124-202ENSMUST00000132683 2083 ntBASIC12.65□□□□□ -0.39
Satb1Q60611 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Satb1Q60611 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Satb1Q60611 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Satb1Q60611 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Satb1Q60611 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Satb1Q60611 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Satb1Q60611 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Satb1Q60611 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Satb1Q60611 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Satb1Q60611 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Satb1Q60611 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Satb1Q60611 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Satb1Q60611 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Satb1Q60611 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Satb1Q60611 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Satb1Q60611 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Satb1Q60611 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Satb1Q60611 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Satb1Q60611 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Satb1Q60611 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Satb1Q60611 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Satb1Q60611 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Satb1Q60611 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Satb1Q60611 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.64□□□□□ -0.39
Satb1Q60611 Gm12015-201ENSMUST00000117065 843 ntBASIC12.64□□□□□ -0.39
Satb1Q60611 Gm14704-201ENSMUST00000120300 874 ntBASIC12.64□□□□□ -0.39
Satb1Q60611 Gm23218-201ENSMUST00000158124 276 ntBASIC12.64□□□□□ -0.39
Satb1Q60611 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Satb1Q60611 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Satb1Q60611 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Satb1Q60611 Gm3793-201ENSMUST00000204973 672 ntBASIC12.64□□□□□ -0.39
Satb1Q60611 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.64□□□□□ -0.39
Satb1Q60611 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12.64□□□□□ -0.39
Satb1Q60611 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Satb1Q60611 Gm9132-201ENSMUST00000210182 832 ntBASIC12.64□□□□□ -0.39
Satb1Q60611 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC12.64□□□□□ -0.39
Satb1Q60611 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.64□□□□□ -0.39
Satb1Q60611 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Satb1Q60611 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Satb1Q60611 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Satb1Q60611 Gm8325-201ENSMUST00000099086 453 ntBASIC12.64□□□□□ -0.39
Satb1Q60611 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Satb1Q60611 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Satb1Q60611 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Satb1Q60611 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.64□□□□□ -0.39
Satb1Q60611 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Satb1Q60611 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Satb1Q60611 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Satb1Q60611 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Satb1Q60611 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Satb1Q60611 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.64□□□□□ -0.39
Satb1Q60611 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Satb1Q60611 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Satb1Q60611 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Satb1Q60611 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Satb1Q60611 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Satb1Q60611 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Satb1Q60611 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.63□□□□□ -0.39
Satb1Q60611 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Satb1Q60611 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Satb1Q60611 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Satb1Q60611 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Satb1Q60611 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms