Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim38Q5SZ99 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.58□□□□□ -0.4
Trim38Q5SZ99 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.58□□□□□ -0.4
Trim38Q5SZ99 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.58□□□□□ -0.4
Trim38Q5SZ99 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim38Q5SZ99 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim38Q5SZ99 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim38Q5SZ99 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim38Q5SZ99 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim38Q5SZ99 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim38Q5SZ99 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim38Q5SZ99 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim38Q5SZ99 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim38Q5SZ99 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim38Q5SZ99 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim38Q5SZ99 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trim38Q5SZ99 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim38Q5SZ99 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim38Q5SZ99 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim38Q5SZ99 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim38Q5SZ99 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim38Q5SZ99 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim38Q5SZ99 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim38Q5SZ99 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim38Q5SZ99 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim38Q5SZ99 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim38Q5SZ99 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.57□□□□□ -0.4
Trim38Q5SZ99 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim38Q5SZ99 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim38Q5SZ99 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim38Q5SZ99 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim38Q5SZ99 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim38Q5SZ99 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim38Q5SZ99 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.57□□□□□ -0.4
Trim38Q5SZ99 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim38Q5SZ99 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim38Q5SZ99 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim38Q5SZ99 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim38Q5SZ99 Gm12241-201ENSMUST00000118330 726 ntBASIC12.57□□□□□ -0.4
Trim38Q5SZ99 Gm14247-201ENSMUST00000120950 237 ntBASIC12.57□□□□□ -0.4
Trim38Q5SZ99 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim38Q5SZ99 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.57□□□□□ -0.4
Trim38Q5SZ99 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
Trim38Q5SZ99 Gm30285-201ENSMUST00000214614 422 ntBASIC12.57□□□□□ -0.4
Trim38Q5SZ99 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim38Q5SZ99 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.57□□□□□ -0.4
Trim38Q5SZ99 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.57□□□□□ -0.4
Trim38Q5SZ99 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim38Q5SZ99 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trim38Q5SZ99 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim38Q5SZ99 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim38Q5SZ99 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim38Q5SZ99 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.57□□□□□ -0.4
Trim38Q5SZ99 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim38Q5SZ99 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim38Q5SZ99 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim38Q5SZ99 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim38Q5SZ99 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.56□□□□□ -0.4
Trim38Q5SZ99 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.56□□□□□ -0.4
Trim38Q5SZ99 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms