Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vps54Q5SPW0 Gm44152-201ENSMUST00000205007 1691 ntBASIC14.5□□□□□ -0.09
Vps54Q5SPW0 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps54Q5SPW0 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps54Q5SPW0 Gm15515-201ENSMUST00000117827 822 ntBASIC14.5□□□□□ -0.09
Vps54Q5SPW0 Gm17040-202ENSMUST00000170597 889 ntBASIC14.5□□□□□ -0.09
Vps54Q5SPW0 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Vps54Q5SPW0 Gm18827-201ENSMUST00000188341 790 ntBASIC14.5□□□□□ -0.09
Vps54Q5SPW0 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC14.5□□□□□ -0.09
Vps54Q5SPW0 Gm8956-201ENSMUST00000203939 825 ntBASIC14.5□□□□□ -0.09
Vps54Q5SPW0 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC14.5□□□□□ -0.09
Vps54Q5SPW0 Gm270-201ENSMUST00000223010 976 ntBASIC14.5□□□□□ -0.09
Vps54Q5SPW0 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps54Q5SPW0 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps54Q5SPW0 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vps54Q5SPW0 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps54Q5SPW0 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps54Q5SPW0 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps54Q5SPW0 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps54Q5SPW0 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps54Q5SPW0 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps54Q5SPW0 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vps54Q5SPW0 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps54Q5SPW0 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vps54Q5SPW0 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps54Q5SPW0 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps54Q5SPW0 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Vps54Q5SPW0 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps54Q5SPW0 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Vps54Q5SPW0 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps54Q5SPW0 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps54Q5SPW0 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Vps54Q5SPW0 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Vps54Q5SPW0 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.49□□□□□ -0.09
Vps54Q5SPW0 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps54Q5SPW0 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps54Q5SPW0 Gm15610-201ENSMUST00000120584 195 ntBASIC14.49□□□□□ -0.09
Vps54Q5SPW0 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Vps54Q5SPW0 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC14.49□□□□□ -0.09
Vps54Q5SPW0 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC14.49□□□□□ -0.09
Vps54Q5SPW0 Gm18038-201ENSMUST00000197900 485 ntBASIC14.49□□□□□ -0.09
Vps54Q5SPW0 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
Vps54Q5SPW0 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps54Q5SPW0 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Vps54Q5SPW0 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Vps54Q5SPW0 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps54Q5SPW0 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC14.49□□□□□ -0.09
Vps54Q5SPW0 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Vps54Q5SPW0 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.49□□□□□ -0.09
Vps54Q5SPW0 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps54Q5SPW0 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps54Q5SPW0 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps54Q5SPW0 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vps54Q5SPW0 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps54Q5SPW0 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vps54Q5SPW0 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps54Q5SPW0 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps54Q5SPW0 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps54Q5SPW0 Gm18983-201ENSMUST00000222884 2729 ntBASIC14.48□□□□□ -0.09
Vps54Q5SPW0 Gm43267-201ENSMUST00000199664 1796 ntBASIC14.48□□□□□ -0.09
Vps54Q5SPW0 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps54Q5SPW0 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Vps54Q5SPW0 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Vps54Q5SPW0 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Vps54Q5SPW0 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Vps54Q5SPW0 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC14.48□□□□□ -0.09
Vps54Q5SPW0 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Vps54Q5SPW0 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
Vps54Q5SPW0 Gm9136-201ENSMUST00000193368 454 ntBASIC14.48□□□□□ -0.09
Vps54Q5SPW0 AU022133-201ENSMUST00000200601 873 ntBASIC14.48□□□□□ -0.09
Vps54Q5SPW0 Gm42599-201ENSMUST00000201308 469 ntBASIC14.48□□□□□ -0.09
Vps54Q5SPW0 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vps54Q5SPW0 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps54Q5SPW0 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps54Q5SPW0 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps54Q5SPW0 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps54Q5SPW0 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps54Q5SPW0 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps54Q5SPW0 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps54Q5SPW0 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps54Q5SPW0 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps54Q5SPW0 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps54Q5SPW0 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps54Q5SPW0 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.48□□□□□ -0.09
Vps54Q5SPW0 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps54Q5SPW0 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps54Q5SPW0 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Vps54Q5SPW0 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps54Q5SPW0 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vps54Q5SPW0 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps54Q5SPW0 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps54Q5SPW0 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps54Q5SPW0 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Vps54Q5SPW0 Gm9072-201ENSMUST00000218390 1514 ntBASIC14.47□□□□□ -0.09
Vps54Q5SPW0 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps54Q5SPW0 Gm8522-201ENSMUST00000118416 1929 ntBASIC14.47□□□□□ -0.09
Vps54Q5SPW0 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps54Q5SPW0 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps54Q5SPW0 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Vps54Q5SPW0 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms