Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm11980-201ENSMUST00000121445 986 ntBASIC13.81□□□□□ -0.2
Ccdc88aQ5SNZ0 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC13.81□□□□□ -0.2
Ccdc88aQ5SNZ0 Mir6998-201ENSMUST00000183343 64 ntBASIC13.81□□□□□ -0.2
Ccdc88aQ5SNZ0 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc88aQ5SNZ0 Mir8115-201ENSMUST00000184992 119 ntBASIC13.81□□□□□ -0.2
Ccdc88aQ5SNZ0 Gm28388-201ENSMUST00000186262 437 ntBASIC13.81□□□□□ -0.2
Ccdc88aQ5SNZ0 Gm17826-201ENSMUST00000189720 798 ntBASIC13.81□□□□□ -0.2
Ccdc88aQ5SNZ0 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc88aQ5SNZ0 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc88aQ5SNZ0 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc88aQ5SNZ0 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.81□□□□□ -0.2
Ccdc88aQ5SNZ0 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc88aQ5SNZ0 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc88aQ5SNZ0 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc88aQ5SNZ0 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc88aQ5SNZ0 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc88aQ5SNZ0 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc88aQ5SNZ0 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Gm8737-201ENSMUST00000122208 642 ntBASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Gm38151-201ENSMUST00000195085 289 ntBASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Gm22877-201ENSMUST00000175451 105 ntBASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Gm17877-201ENSMUST00000192578 814 ntBASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Gm18059-201ENSMUST00000208073 580 ntBASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Gm2553-201ENSMUST00000215986 605 ntBASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Lgi3-203ENSMUST00000226548 1001 ntBASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
Ccdc88aQ5SNZ0 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 n-R5s64-201ENSMUST00000102019 119 ntBASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 Gm12579-201ENSMUST00000118040 783 ntBASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 Gm4862-201ENSMUST00000170405 438 ntBASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 Gm12407-201ENSMUST00000180219 324 ntBASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 Gm8894-201ENSMUST00000074642 666 ntBASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms