Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav5d-4Q5R1F6 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5d-4Q5R1F6 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5d-4Q5R1F6 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5d-4Q5R1F6 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5d-4Q5R1F6 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5d-4Q5R1F6 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5d-4Q5R1F6 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Trav5d-4Q5R1F6 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5d-4Q5R1F6 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5d-4Q5R1F6 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5d-4Q5R1F6 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5d-4Q5R1F6 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.4□□□□□ -0.74
Trav5d-4Q5R1F6 Gm25214-201ENSMUST00000104573 129 ntBASIC10.4□□□□□ -0.74
Trav5d-4Q5R1F6 Gm23912-201ENSMUST00000104687 87 ntBASIC10.4□□□□□ -0.74
Trav5d-4Q5R1F6 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5d-4Q5R1F6 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Trav5d-4Q5R1F6 Gm13297-201ENSMUST00000120205 934 ntBASIC10.4□□□□□ -0.74
Trav5d-4Q5R1F6 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5d-4Q5R1F6 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC10.4□□□□□ -0.74
Trav5d-4Q5R1F6 Gm24845-201ENSMUST00000158034 109 ntBASIC10.4□□□□□ -0.74
Trav5d-4Q5R1F6 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5d-4Q5R1F6 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5d-4Q5R1F6 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.4□□□□□ -0.74
Trav5d-4Q5R1F6 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5d-4Q5R1F6 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.4□□□□□ -0.74
Trav5d-4Q5R1F6 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.4□□□□□ -0.74
Trav5d-4Q5R1F6 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
Trav5d-4Q5R1F6 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Trav5d-4Q5R1F6 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5d-4Q5R1F6 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.4□□□□□ -0.74
Trav5d-4Q5R1F6 Gm18935-201ENSMUST00000212692 664 ntBASIC10.4□□□□□ -0.74
Trav5d-4Q5R1F6 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC10.4□□□□□ -0.74
Trav5d-4Q5R1F6 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5d-4Q5R1F6 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5d-4Q5R1F6 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5d-4Q5R1F6 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5d-4Q5R1F6 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav5d-4Q5R1F6 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav5d-4Q5R1F6 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.4□□□□□ -0.75
Trav5d-4Q5R1F6 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.75
Trav5d-4Q5R1F6 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav5d-4Q5R1F6 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Gm6013-201ENSMUST00000212264 699 ntBASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5d-4Q5R1F6 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms