Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Trim41Q5NCC3 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Trim41Q5NCC3 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC21.05■□□□□ 0.96
Trim41Q5NCC3 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC21.05■□□□□ 0.96
Trim41Q5NCC3 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim41Q5NCC3 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim41Q5NCC3 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim41Q5NCC3 Gm44942-201ENSMUST00000096093 2072 ntBASIC21.05■□□□□ 0.96
Trim41Q5NCC3 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
Trim41Q5NCC3 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trim41Q5NCC3 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim41Q5NCC3 Gm5419-201ENSMUST00000119301 527 ntBASIC21.05■□□□□ 0.96
Trim41Q5NCC3 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim41Q5NCC3 Gm4726-201ENSMUST00000135604 736 ntBASIC21.05■□□□□ 0.96
Trim41Q5NCC3 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC21.05■□□□□ 0.96
Trim41Q5NCC3 Gm6019-201ENSMUST00000148369 736 ntBASIC21.05■□□□□ 0.96
Trim41Q5NCC3 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trim41Q5NCC3 Gm6397-201ENSMUST00000161973 1069 ntBASIC21.05■□□□□ 0.96
Trim41Q5NCC3 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Trim41Q5NCC3 Gm42657-201ENSMUST00000201746 211 ntBASIC21.05■□□□□ 0.96
Trim41Q5NCC3 AC125117.2-201ENSMUST00000228344 1140 ntBASIC21.05■□□□□ 0.96
Trim41Q5NCC3 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim41Q5NCC3 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC21.05■□□□□ 0.96
Trim41Q5NCC3 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim41Q5NCC3 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trim41Q5NCC3 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim41Q5NCC3 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim41Q5NCC3 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim41Q5NCC3 Gm9129-201ENSMUST00000218173 1689 ntBASIC21.05■□□□□ 0.96
Trim41Q5NCC3 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim41Q5NCC3 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim41Q5NCC3 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trim41Q5NCC3 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim41Q5NCC3 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim41Q5NCC3 Gm13809-201ENSMUST00000117921 597 ntBASIC21.04■□□□□ 0.96
Trim41Q5NCC3 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trim41Q5NCC3 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trim41Q5NCC3 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trim41Q5NCC3 Gm10774-201ENSMUST00000188689 204 ntBASIC21.04■□□□□ 0.96
Trim41Q5NCC3 AC121960.1-201ENSMUST00000227982 564 ntBASIC21.04■□□□□ 0.96
Trim41Q5NCC3 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim41Q5NCC3 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Trim41Q5NCC3 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Trim41Q5NCC3 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trim41Q5NCC3 Gm45266-201ENSMUST00000210111 2173 ntBASIC21.04■□□□□ 0.96
Trim41Q5NCC3 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim41Q5NCC3 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Trim41Q5NCC3 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
Trim41Q5NCC3 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim41Q5NCC3 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC21.04■□□□□ 0.96
Trim41Q5NCC3 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC21.04■□□□□ 0.96
Trim41Q5NCC3 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trim41Q5NCC3 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC21.04■□□□□ 0.96
Trim41Q5NCC3 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Trim41Q5NCC3 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim41Q5NCC3 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim41Q5NCC3 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Trim41Q5NCC3 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim41Q5NCC3 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Trim41Q5NCC3 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim41Q5NCC3 Gm37131-201ENSMUST00000192502 1561 ntBASIC21.03■□□□□ 0.96
Trim41Q5NCC3 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim41Q5NCC3 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC21.03■□□□□ 0.96
Trim41Q5NCC3 Gm26989-201ENSMUST00000182608 749 ntBASIC21.03■□□□□ 0.96
Trim41Q5NCC3 Gm18706-201ENSMUST00000210053 1066 ntBASIC21.03■□□□□ 0.96
Trim41Q5NCC3 AC098716.1-201ENSMUST00000213527 703 ntBASIC21.03■□□□□ 0.96
Trim41Q5NCC3 AC168279.1-201ENSMUST00000214611 382 ntBASIC21.03■□□□□ 0.96
Trim41Q5NCC3 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC21.03■□□□□ 0.96
Trim41Q5NCC3 Gm40879-201ENSMUST00000220759 612 ntBASIC21.03■□□□□ 0.96
Trim41Q5NCC3 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Trim41Q5NCC3 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim41Q5NCC3 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
Trim41Q5NCC3 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim41Q5NCC3 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim41Q5NCC3 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Trim41Q5NCC3 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
Trim41Q5NCC3 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
Trim41Q5NCC3 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
Trim41Q5NCC3 AC160405.1-201ENSMUST00000218207 1545 ntBASIC21.03■□□□□ 0.96
Trim41Q5NCC3 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim41Q5NCC3 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim41Q5NCC3 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Trim41Q5NCC3 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Trim41Q5NCC3 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim41Q5NCC3 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim41Q5NCC3 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim41Q5NCC3 Gm43267-201ENSMUST00000199664 1796 ntBASIC21.02■□□□□ 0.96
Trim41Q5NCC3 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim41Q5NCC3 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Trim41Q5NCC3 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC21.02■□□□□ 0.96
Trim41Q5NCC3 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim41Q5NCC3 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim41Q5NCC3 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim41Q5NCC3 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trim41Q5NCC3 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Trim41Q5NCC3 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim41Q5NCC3 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim41Q5NCC3 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim41Q5NCC3 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trim41Q5NCC3 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms