Protein–RNA interactions for Protein: Q505G4

Rtl6, Retrotransposon Gag-like protein 6, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl6Q505G4 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rtl6Q505G4 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.36□□□□□ -0.75
Rtl6Q505G4 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rtl6Q505G4 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rtl6Q505G4 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.36□□□□□ -0.75
Rtl6Q505G4 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rtl6Q505G4 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Rtl6Q505G4 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC10.36□□□□□ -0.75
Rtl6Q505G4 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC10.36□□□□□ -0.75
Rtl6Q505G4 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.36□□□□□ -0.75
Rtl6Q505G4 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.36□□□□□ -0.75
Rtl6Q505G4 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.36□□□□□ -0.75
Rtl6Q505G4 Gm44262-201ENSMUST00000204969 372 ntBASIC10.36□□□□□ -0.75
Rtl6Q505G4 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.36□□□□□ -0.75
Rtl6Q505G4 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC10.36□□□□□ -0.75
Rtl6Q505G4 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rtl6Q505G4 AC159747.1-201ENSMUST00000219903 265 ntBASIC10.36□□□□□ -0.75
Rtl6Q505G4 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.36□□□□□ -0.75
Rtl6Q505G4 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC10.36□□□□□ -0.75
Rtl6Q505G4 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rtl6Q505G4 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rtl6Q505G4 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rtl6Q505G4 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rtl6Q505G4 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rtl6Q505G4 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
Rtl6Q505G4 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.36□□□□□ -0.75
Rtl6Q505G4 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rtl6Q505G4 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rtl6Q505G4 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.36□□□□□ -0.75
Rtl6Q505G4 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Rtl6Q505G4 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rtl6Q505G4 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rtl6Q505G4 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rtl6Q505G4 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rtl6Q505G4 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rtl6Q505G4 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rtl6Q505G4 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rtl6Q505G4 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rtl6Q505G4 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Gm24934-201ENSMUST00000103764 111 ntBASIC10.35□□□□□ -0.75
Rtl6Q505G4 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Gm8856-201ENSMUST00000185254 1144 ntBASIC10.35□□□□□ -0.75
Rtl6Q505G4 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Gm45186-201ENSMUST00000206874 478 ntBASIC10.35□□□□□ -0.75
Rtl6Q505G4 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC10.35□□□□□ -0.75
Rtl6Q505G4 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.35□□□□□ -0.75
Rtl6Q505G4 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.35□□□□□ -0.75
Rtl6Q505G4 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Gm9996-201ENSMUST00000070359 913 ntBASIC10.35□□□□□ -0.75
Rtl6Q505G4 Mir433-201ENSMUST00000093564 124 ntBASIC10.35□□□□□ -0.75
Rtl6Q505G4 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.35□□□□□ -0.75
Rtl6Q505G4 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Gm43908-201ENSMUST00000205074 1472 ntBASIC10.35□□□□□ -0.75
Rtl6Q505G4 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.35□□□□□ -0.75
Rtl6Q505G4 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rtl6Q505G4 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Rtl6Q505G4 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Rtl6Q505G4 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rtl6Q505G4 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rtl6Q505G4 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rtl6Q505G4 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.34□□□□□ -0.75
Rtl6Q505G4 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.34□□□□□ -0.75
Rtl6Q505G4 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms