Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC14.04□□□□□ -0.16
Rnf180Q3U827 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Rnf180Q3U827 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rnf180Q3U827 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf180Q3U827 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf180Q3U827 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rnf180Q3U827 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf180Q3U827 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf180Q3U827 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf180Q3U827 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf180Q3U827 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Rnf180Q3U827 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf180Q3U827 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf180Q3U827 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf180Q3U827 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.04□□□□□ -0.16
Rnf180Q3U827 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.03□□□□□ -0.16
Rnf180Q3U827 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.03□□□□□ -0.16
Rnf180Q3U827 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf180Q3U827 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf180Q3U827 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.03□□□□□ -0.16
Rnf180Q3U827 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf180Q3U827 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rnf180Q3U827 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf180Q3U827 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf180Q3U827 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rnf180Q3U827 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rnf180Q3U827 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf180Q3U827 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rnf180Q3U827 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf180Q3U827 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf180Q3U827 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf180Q3U827 Gm23129-201ENSMUST00000104259 132 ntBASIC14.03□□□□□ -0.16
Rnf180Q3U827 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf180Q3U827 Gm12247-201ENSMUST00000117585 670 ntBASIC14.03□□□□□ -0.16
Rnf180Q3U827 Gm14113-201ENSMUST00000121399 976 ntBASIC14.03□□□□□ -0.16
Rnf180Q3U827 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC14.03□□□□□ -0.16
Rnf180Q3U827 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf180Q3U827 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf180Q3U827 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf180Q3U827 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf180Q3U827 Gm38135-201ENSMUST00000195068 502 ntBASIC14.03□□□□□ -0.16
Rnf180Q3U827 Gm42687-201ENSMUST00000199075 164 ntBASIC14.03□□□□□ -0.16
Rnf180Q3U827 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC14.03□□□□□ -0.16
Rnf180Q3U827 Gm9644-201ENSMUST00000212828 1183 ntBASIC14.03□□□□□ -0.16
Rnf180Q3U827 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf180Q3U827 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC14.03□□□□□ -0.16
Rnf180Q3U827 Gm18642-201ENSMUST00000206642 1400 ntBASIC14.03□□□□□ -0.16
Rnf180Q3U827 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rnf180Q3U827 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf180Q3U827 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf180Q3U827 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.03□□□□□ -0.16
Rnf180Q3U827 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf180Q3U827 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf180Q3U827 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.03□□□□□ -0.16
Rnf180Q3U827 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rnf180Q3U827 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Rnf180Q3U827 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf180Q3U827 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf180Q3U827 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Rnf180Q3U827 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf180Q3U827 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf180Q3U827 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf180Q3U827 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rnf180Q3U827 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf180Q3U827 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf180Q3U827 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.02□□□□□ -0.16
Rnf180Q3U827 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.02□□□□□ -0.16
Rnf180Q3U827 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.02□□□□□ -0.16
Rnf180Q3U827 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf180Q3U827 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf180Q3U827 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf180Q3U827 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf180Q3U827 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC14.02□□□□□ -0.17
Rnf180Q3U827 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf180Q3U827 Gm22763-201ENSMUST00000158374 107 ntBASIC14.02□□□□□ -0.17
Rnf180Q3U827 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC14.02□□□□□ -0.17
Rnf180Q3U827 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC14.02□□□□□ -0.17
Rnf180Q3U827 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC14.02□□□□□ -0.17
Rnf180Q3U827 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC14.02□□□□□ -0.17
Rnf180Q3U827 Gm31274-201ENSMUST00000197356 229 ntBASIC14.02□□□□□ -0.17
Rnf180Q3U827 AC129217.1-201ENSMUST00000225181 642 ntBASIC14.02□□□□□ -0.17
Rnf180Q3U827 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf180Q3U827 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Rnf180Q3U827 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Rnf180Q3U827 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf180Q3U827 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf180Q3U827 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf180Q3U827 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf180Q3U827 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf180Q3U827 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.02□□□□□ -0.17
Rnf180Q3U827 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf180Q3U827 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf180Q3U827 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf180Q3U827 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf180Q3U827 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf180Q3U827 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf180Q3U827 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf180Q3U827 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf180Q3U827 Gm43167-201ENSMUST00000202001 1606 ntBASIC14.01□□□□□ -0.17
Rnf180Q3U827 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms