Protein–RNA interactions for Protein: Q3U2C5

Rnf149, E3 ubiquitin-protein ligase RNF149, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf149Q3U2C5 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Rnf149Q3U2C5 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf149Q3U2C5 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf149Q3U2C5 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf149Q3U2C5 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf149Q3U2C5 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.88□□□□□ -0.67
Rnf149Q3U2C5 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf149Q3U2C5 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf149Q3U2C5 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf149Q3U2C5 BC043934-202ENSMUST00000185694 2356 ntBASIC10.88□□□□□ -0.67
Rnf149Q3U2C5 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.88□□□□□ -0.67
Rnf149Q3U2C5 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf149Q3U2C5 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf149Q3U2C5 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf149Q3U2C5 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 Gm26927-201ENSMUST00000182385 965 ntBASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 Gm44882-201ENSMUST00000205702 802 ntBASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf149Q3U2C5 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 Gm38157-201ENSMUST00000194178 1698 ntBASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 Gm17420-201ENSMUST00000164753 153 ntBASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 Gm4768-201ENSMUST00000206199 686 ntBASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.86□□□□□ -0.67
Rnf149Q3U2C5 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.85□□□□□ -0.67
Rnf149Q3U2C5 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf149Q3U2C5 Gm5620-201ENSMUST00000077991 1348 ntBASIC10.85□□□□□ -0.67
Rnf149Q3U2C5 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms