Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43aQ3TL54 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trim43aQ3TL54 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43aQ3TL54 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.85□□□□□ -0.35
Trim43aQ3TL54 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43aQ3TL54 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim43aQ3TL54 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43aQ3TL54 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43aQ3TL54 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43aQ3TL54 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.84□□□□□ -0.35
Trim43aQ3TL54 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43aQ3TL54 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43aQ3TL54 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim43aQ3TL54 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43aQ3TL54 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43aQ3TL54 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43aQ3TL54 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim43aQ3TL54 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43aQ3TL54 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trim43aQ3TL54 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trim43aQ3TL54 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43aQ3TL54 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43aQ3TL54 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.84□□□□□ -0.35
Trim43aQ3TL54 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43aQ3TL54 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.84□□□□□ -0.35
Trim43aQ3TL54 Gm17420-201ENSMUST00000164753 153 ntBASIC12.84□□□□□ -0.35
Trim43aQ3TL54 Gm26927-201ENSMUST00000182385 965 ntBASIC12.84□□□□□ -0.35
Trim43aQ3TL54 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim43aQ3TL54 Gm45930-201ENSMUST00000221330 292 ntBASIC12.84□□□□□ -0.35
Trim43aQ3TL54 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43aQ3TL54 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43aQ3TL54 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43aQ3TL54 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43aQ3TL54 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43aQ3TL54 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43aQ3TL54 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43aQ3TL54 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trim43aQ3TL54 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.84□□□□□ -0.35
Trim43aQ3TL54 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43aQ3TL54 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Trim43aQ3TL54 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43aQ3TL54 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trim43aQ3TL54 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trim43aQ3TL54 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Trim43aQ3TL54 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43aQ3TL54 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43aQ3TL54 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Trim43aQ3TL54 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43aQ3TL54 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43aQ3TL54 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43aQ3TL54 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.83□□□□□ -0.36
Trim43aQ3TL54 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43aQ3TL54 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43aQ3TL54 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trim43aQ3TL54 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43aQ3TL54 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trim43aQ3TL54 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.83□□□□□ -0.36
Trim43aQ3TL54 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.83□□□□□ -0.36
Trim43aQ3TL54 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.83□□□□□ -0.36
Trim43aQ3TL54 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43aQ3TL54 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.83□□□□□ -0.36
Trim43aQ3TL54 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.83□□□□□ -0.36
Trim43aQ3TL54 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.83□□□□□ -0.36
Trim43aQ3TL54 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43aQ3TL54 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trim43aQ3TL54 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trim43aQ3TL54 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43aQ3TL54 Gm22058-201ENSMUST00000083393 310 ntBASIC12.83□□□□□ -0.36
Trim43aQ3TL54 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43aQ3TL54 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43aQ3TL54 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.83□□□□□ -0.36
Trim43aQ3TL54 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43aQ3TL54 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43aQ3TL54 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43aQ3TL54 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43aQ3TL54 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43aQ3TL54 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43aQ3TL54 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43aQ3TL54 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43aQ3TL54 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.82□□□□□ -0.36
Trim43aQ3TL54 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43aQ3TL54 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trim43aQ3TL54 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trim43aQ3TL54 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Trim43aQ3TL54 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Trim43aQ3TL54 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43aQ3TL54 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43aQ3TL54 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43aQ3TL54 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.82□□□□□ -0.36
Trim43aQ3TL54 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43aQ3TL54 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43aQ3TL54 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.82□□□□□ -0.36
Trim43aQ3TL54 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43aQ3TL54 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43aQ3TL54 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43aQ3TL54 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.82□□□□□ -0.36
Trim43aQ3TL54 Gm5370-201ENSMUST00000187187 574 ntBASIC12.82□□□□□ -0.36
Trim43aQ3TL54 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.82□□□□□ -0.36
Trim43aQ3TL54 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.82□□□□□ -0.36
Trim43aQ3TL54 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms