Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Gabarap-202ENSMUST00000108592 750 ntTSL 3 BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Fhl1-206ENSMUST00000116596 1203 ntTSL 5 BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Olfr754-ps1-201ENSMUST00000173181 911 ntBASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Gm17980-201ENSMUST00000217977 2349 ntBASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Rhox3f-201ENSMUST00000115172 833 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Gm13688-201ENSMUST00000121557 608 ntBASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Gm25319-201ENSMUST00000122552 325 ntBASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Grip1os1-201ENSMUST00000126965 1084 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Gm14344-201ENSMUST00000139338 580 ntTSL 3 BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Gm27383-201ENSMUST00000184418 361 ntBASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Rhox3f-203ENSMUST00000184451 1008 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Gm29485-201ENSMUST00000190220 282 ntBASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Gm6352-201ENSMUST00000203583 1134 ntBASIC6.18□□□□□ -1.42
Ush2AQ2QI47 D830044I16Rik-203ENSMUST00000205437 1016 ntAPPRIS P5 TSL 5 BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Gm8960-201ENSMUST00000219787 788 ntBASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Gm25580-201ENSMUST00000083409 327 ntBASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Gm43056-201ENSMUST00000197865 2791 ntBASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Gm14538-201ENSMUST00000122019 1327 ntBASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Gm37795-201ENSMUST00000194216 2459 ntBASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Gng12-207ENSMUST00000114228 748 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Ucma-202ENSMUST00000115010 847 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Gm2021-201ENSMUST00000190623 464 ntBASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Gm42620-201ENSMUST00000197715 630 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 CT030195.2-201ENSMUST00000226074 1286 ntBASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Gm33180-201ENSMUST00000217109 1480 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 2310016D03Rik-201ENSMUST00000190206 1547 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ush2AQ2QI47 Cd14-201ENSMUST00000061829 1572 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Gm44640-201ENSMUST00000206894 247 ntBASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Pla2g2a-201ENSMUST00000077582 784 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 AC165351.1-201ENSMUST00000219078 2020 ntBASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Gm10584-201ENSMUST00000207036 2628 ntBASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Gm8155-201ENSMUST00000216363 1612 ntBASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Gm7061-201ENSMUST00000118127 1416 ntBASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Gm8864-201ENSMUST00000118653 1010 ntBASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Wdr17-204ENSMUST00000129132 1043 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Arpp19-207ENSMUST00000169188 216 ntTSL 5 BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Gm20474-201ENSMUST00000180089 596 ntBASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Mir8091-201ENSMUST00000183602 139 ntBASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Gm27200-201ENSMUST00000184626 657 ntTSL 3 BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Gm34248-201ENSMUST00000200027 474 ntBASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Snrp1c-ps1-201ENSMUST00000205464 474 ntBASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 AC163351.1-201ENSMUST00000225539 737 ntBASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Cenph-201ENSMUST00000075550 1251 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Olfr53-201ENSMUST00000084456 1328 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms