Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Cdx4Q07424 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cdx4Q07424 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cdx4Q07424 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC9.39□□□□□ -0.91
Cdx4Q07424 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Cdx4Q07424 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Cdx4Q07424 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Cdx4Q07424 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC9.39□□□□□ -0.91
Cdx4Q07424 Rmrp-201ENSMUST00000157463 271 ntBASIC9.39□□□□□ -0.91
Cdx4Q07424 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Cdx4Q07424 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC9.39□□□□□ -0.91
Cdx4Q07424 Gm38241-201ENSMUST00000192641 898 ntBASIC9.39□□□□□ -0.91
Cdx4Q07424 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC9.39□□□□□ -0.91
Cdx4Q07424 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Cdx4Q07424 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cdx4Q07424 Gm19963-201ENSMUST00000208413 1255 ntBASIC9.39□□□□□ -0.91
Cdx4Q07424 Gm30285-201ENSMUST00000214614 422 ntBASIC9.39□□□□□ -0.91
Cdx4Q07424 AL732506.1-201ENSMUST00000226420 281 ntBASIC9.39□□□□□ -0.91
Cdx4Q07424 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cdx4Q07424 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Cdx4Q07424 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Cdx4Q07424 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Cdx4Q07424 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cdx4Q07424 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cdx4Q07424 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cdx4Q07424 Gm44806-201ENSMUST00000205574 2303 ntBASIC9.39□□□□□ -0.91
Cdx4Q07424 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cdx4Q07424 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
Cdx4Q07424 Gm19221-201ENSMUST00000221827 1477 ntBASIC9.39□□□□□ -0.91
Cdx4Q07424 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cdx4Q07424 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Cdx4Q07424 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Cdx4Q07424 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cdx4Q07424 Gm7789-202ENSMUST00000211273 1400 ntBASIC9.39□□□□□ -0.91
Cdx4Q07424 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cdx4Q07424 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Cdx4Q07424 Gm42706-201ENSMUST00000199733 1910 ntBASIC9.39□□□□□ -0.91
Cdx4Q07424 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cdx4Q07424 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cdx4Q07424 Rgr-203ENSMUST00000225070 4704 ntBASIC9.39□□□□□ -0.91
Cdx4Q07424 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Cdx4Q07424 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cdx4Q07424 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cdx4Q07424 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cdx4Q07424 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Cdx4Q07424 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cdx4Q07424 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cdx4Q07424 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cdx4Q07424 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Cdx4Q07424 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC9.38□□□□□ -0.91
Cdx4Q07424 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Cdx4Q07424 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Cdx4Q07424 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cdx4Q07424 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Cdx4Q07424 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cdx4Q07424 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Cdx4Q07424 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Cdx4Q07424 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cdx4Q07424 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Cdx4Q07424 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Cdx4Q07424 Gm2238-201ENSMUST00000192074 3669 ntBASIC9.38□□□□□ -0.91
Cdx4Q07424 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cdx4Q07424 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC9.38□□□□□ -0.91
Cdx4Q07424 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC9.38□□□□□ -0.91
Cdx4Q07424 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cdx4Q07424 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cdx4Q07424 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Cdx4Q07424 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC9.38□□□□□ -0.91
Cdx4Q07424 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Cdx4Q07424 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Cdx4Q07424 Gm14726-201ENSMUST00000120623 896 ntBASIC9.38□□□□□ -0.91
Cdx4Q07424 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Cdx4Q07424 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Cdx4Q07424 Gm16570-201ENSMUST00000161951 436 ntBASIC9.38□□□□□ -0.91
Cdx4Q07424 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Cdx4Q07424 Gm27023-201ENSMUST00000182372 285 ntBASIC9.38□□□□□ -0.91
Cdx4Q07424 Gm37259-201ENSMUST00000193903 849 ntBASIC9.38□□□□□ -0.91
Cdx4Q07424 Gm18056-201ENSMUST00000207670 568 ntBASIC9.38□□□□□ -0.91
Cdx4Q07424 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Cdx4Q07424 Gm18061-201ENSMUST00000208350 562 ntBASIC9.38□□□□□ -0.91
Cdx4Q07424 Gm18063-201ENSMUST00000208529 568 ntBASIC9.38□□□□□ -0.91
Cdx4Q07424 Gm18052-201ENSMUST00000208750 559 ntBASIC9.38□□□□□ -0.91
Cdx4Q07424 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC9.38□□□□□ -0.91
Cdx4Q07424 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cdx4Q07424 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Cdx4Q07424 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cdx4Q07424 Gm26035-201ENSMUST00000083065 308 ntBASIC9.38□□□□□ -0.91
Cdx4Q07424 Gm22058-201ENSMUST00000083393 310 ntBASIC9.38□□□□□ -0.91
Cdx4Q07424 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cdx4Q07424 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cdx4Q07424 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cdx4Q07424 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Cdx4Q07424 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cdx4Q07424 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cdx4Q07424 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cdx4Q07424 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Cdx4Q07424 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Cdx4Q07424 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cdx4Q07424 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cdx4Q07424 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms