Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm5190-201ENSMUST00000192434 357 ntBASIC12.19□□□□□ -0.46
Col9a1Q05722 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.19□□□□□ -0.46
Col9a1Q05722 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC12.19□□□□□ -0.46
Col9a1Q05722 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC12.19□□□□□ -0.46
Col9a1Q05722 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a1Q05722 Gm18968-201ENSMUST00000221319 862 ntBASIC12.19□□□□□ -0.46
Col9a1Q05722 Gm30709-202ENSMUST00000222476 956 ntTSL 5 BASIC12.19□□□□□ -0.46
Col9a1Q05722 A1cf-203ENSMUST00000224400 1204 ntBASIC12.19□□□□□ -0.46
Col9a1Q05722 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a1Q05722 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Col9a1Q05722 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a1Q05722 Gm9791-201ENSMUST00000060997 447 ntBASIC12.19□□□□□ -0.46
Col9a1Q05722 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Col9a1Q05722 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Col9a1Q05722 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Col9a1Q05722 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Col9a1Q05722 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a1Q05722 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a1Q05722 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.19□□□□□ -0.46
Col9a1Q05722 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a1Q05722 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a1Q05722 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Col9a1Q05722 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a1Q05722 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a1Q05722 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.19□□□□□ -0.46
Col9a1Q05722 Ucp1-201ENSMUST00000034146 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a1Q05722 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a1Q05722 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a1Q05722 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a1Q05722 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a1Q05722 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a1Q05722 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a1Q05722 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.18□□□□□ -0.46
Col9a1Q05722 Gm6641-201ENSMUST00000196100 1315 ntBASIC12.18□□□□□ -0.46
Col9a1Q05722 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a1Q05722 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a1Q05722 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a1Q05722 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.18□□□□□ -0.46
Col9a1Q05722 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.18□□□□□ -0.46
Col9a1Q05722 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a1Q05722 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.18□□□□□ -0.46
Col9a1Q05722 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a1Q05722 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.18□□□□□ -0.46
Col9a1Q05722 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.18□□□□□ -0.46
Col9a1Q05722 Gm16210-201ENSMUST00000122161 610 ntBASIC12.18□□□□□ -0.46
Col9a1Q05722 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a1Q05722 4933438A12Rik-201ENSMUST00000144579 1013 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a1Q05722 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a1Q05722 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a1Q05722 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a1Q05722 Gm24809-201ENSMUST00000175318 271 ntBASIC12.18□□□□□ -0.46
Col9a1Q05722 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.18□□□□□ -0.46
Col9a1Q05722 Gm28437-201ENSMUST00000190277 783 ntBASIC12.18□□□□□ -0.46
Col9a1Q05722 Gm38191-201ENSMUST00000194509 770 ntTSL 5 BASIC12.18□□□□□ -0.46
Col9a1Q05722 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a1Q05722 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a1Q05722 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a1Q05722 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC12.18□□□□□ -0.46
Col9a1Q05722 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Col9a1Q05722 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.18□□□□□ -0.46
Col9a1Q05722 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Col9a1Q05722 AC120394.1-201ENSMUST00000217153 351 ntBASIC12.18□□□□□ -0.46
Col9a1Q05722 AC129975.1-201ENSMUST00000224816 592 ntBASIC12.18□□□□□ -0.46
Col9a1Q05722 AC151902.1-201ENSMUST00000227800 375 ntBASIC12.18□□□□□ -0.46
Col9a1Q05722 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Col9a1Q05722 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a1Q05722 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a1Q05722 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Col9a1Q05722 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a1Q05722 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Col9a1Q05722 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a1Q05722 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.18□□□□□ -0.46
Col9a1Q05722 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a1Q05722 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a1Q05722 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Col9a1Q05722 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Col9a1Q05722 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.18□□□□□ -0.46
Col9a1Q05722 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Col9a1Q05722 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a1Q05722 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a1Q05722 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a1Q05722 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a1Q05722 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Col9a1Q05722 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a1Q05722 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Col9a1Q05722 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a1Q05722 Gm7647-201ENSMUST00000200996 1389 ntBASIC12.18□□□□□ -0.46
Col9a1Q05722 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a1Q05722 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a1Q05722 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a1Q05722 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a1Q05722 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a1Q05722 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a1Q05722 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Col9a1Q05722 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a1Q05722 Gm7701-201ENSMUST00000163185 1479 ntBASIC12.17□□□□□ -0.46
Col9a1Q05722 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a1Q05722 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Col9a1Q05722 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a1Q05722 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms