Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Gm44551-201ENSMUST00000208804 171 ntBASIC13.72□□□□□ -0.21
GabpaQ00422 D9Wsu149-201ENSMUST00000214169 594 ntBASIC13.72□□□□□ -0.21
GabpaQ00422 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
GabpaQ00422 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
GabpaQ00422 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
GabpaQ00422 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GabpaQ00422 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
GabpaQ00422 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GabpaQ00422 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GabpaQ00422 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
GabpaQ00422 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GabpaQ00422 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
GabpaQ00422 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GabpaQ00422 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GabpaQ00422 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
GabpaQ00422 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
GabpaQ00422 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
GabpaQ00422 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.72□□□□□ -0.21
GabpaQ00422 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GabpaQ00422 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
GabpaQ00422 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.72□□□□□ -0.21
GabpaQ00422 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GabpaQ00422 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
GabpaQ00422 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GabpaQ00422 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GabpaQ00422 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
GabpaQ00422 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GabpaQ00422 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
GabpaQ00422 Gm43807-201ENSMUST00000200678 1781 ntBASIC13.71□□□□□ -0.21
GabpaQ00422 Gm21998-201ENSMUST00000117552 1308 ntBASIC13.71□□□□□ -0.21
GabpaQ00422 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GabpaQ00422 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GabpaQ00422 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GabpaQ00422 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GabpaQ00422 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC13.71□□□□□ -0.21
GabpaQ00422 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.71□□□□□ -0.21
GabpaQ00422 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.71□□□□□ -0.21
GabpaQ00422 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GabpaQ00422 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GabpaQ00422 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC13.71□□□□□ -0.21
GabpaQ00422 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
GabpaQ00422 Gm13263-201ENSMUST00000121271 838 ntBASIC13.71□□□□□ -0.21
GabpaQ00422 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC13.71□□□□□ -0.21
GabpaQ00422 Gm19459-201ENSMUST00000176240 835 ntBASIC13.71□□□□□ -0.21
GabpaQ00422 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GabpaQ00422 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.71□□□□□ -0.21
GabpaQ00422 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GabpaQ00422 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC13.71□□□□□ -0.21
GabpaQ00422 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC13.71□□□□□ -0.21
GabpaQ00422 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
GabpaQ00422 Gm45575-201ENSMUST00000210283 548 ntBASIC13.71□□□□□ -0.21
GabpaQ00422 Gm9826-201ENSMUST00000029124 1299 ntBASIC13.71□□□□□ -0.21
GabpaQ00422 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GabpaQ00422 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
GabpaQ00422 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
GabpaQ00422 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
GabpaQ00422 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
GabpaQ00422 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
GabpaQ00422 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GabpaQ00422 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GabpaQ00422 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GabpaQ00422 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GabpaQ00422 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GabpaQ00422 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
GabpaQ00422 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GabpaQ00422 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GabpaQ00422 Gm9387-201ENSMUST00000098624 1320 ntBASIC13.7□□□□□ -0.22
GabpaQ00422 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GabpaQ00422 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GabpaQ00422 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
GabpaQ00422 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
GabpaQ00422 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
GabpaQ00422 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GabpaQ00422 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GabpaQ00422 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
GabpaQ00422 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GabpaQ00422 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
GabpaQ00422 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GabpaQ00422 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
GabpaQ00422 Gm15610-201ENSMUST00000120584 195 ntBASIC13.7□□□□□ -0.22
GabpaQ00422 Mup-ps26-201ENSMUST00000121751 202 ntBASIC13.7□□□□□ -0.22
GabpaQ00422 Gm15881-201ENSMUST00000148792 942 ntBASIC13.7□□□□□ -0.22
GabpaQ00422 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC13.7□□□□□ -0.22
GabpaQ00422 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GabpaQ00422 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC13.7□□□□□ -0.22
GabpaQ00422 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC13.7□□□□□ -0.22
GabpaQ00422 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC13.7□□□□□ -0.22
GabpaQ00422 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GabpaQ00422 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
GabpaQ00422 Gm17931-201ENSMUST00000208132 634 ntBASIC13.7□□□□□ -0.22
GabpaQ00422 AC141438.2-201ENSMUST00000215068 271 ntBASIC13.7□□□□□ -0.22
GabpaQ00422 Gm7395-201ENSMUST00000216059 1045 ntBASIC13.7□□□□□ -0.22
GabpaQ00422 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC13.7□□□□□ -0.22
GabpaQ00422 AC135114.1-201ENSMUST00000228682 270 ntBASIC13.7□□□□□ -0.22
GabpaQ00422 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
GabpaQ00422 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
GabpaQ00422 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GabpaQ00422 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GabpaQ00422 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.7□□□□□ -0.22
GabpaQ00422 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms