Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scn1bP97952 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scn1bP97952 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Scn1bP97952 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Scn1bP97952 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scn1bP97952 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scn1bP97952 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Scn1bP97952 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Scn1bP97952 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scn1bP97952 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scn1bP97952 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scn1bP97952 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Scn1bP97952 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scn1bP97952 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Scn1bP97952 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Scn1bP97952 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Scn1bP97952 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Scn1bP97952 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scn1bP97952 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Scn1bP97952 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.05□□□□□ -0.64
Scn1bP97952 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scn1bP97952 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.04□□□□□ -0.64
Scn1bP97952 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Scn1bP97952 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scn1bP97952 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scn1bP97952 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.04□□□□□ -0.64
Scn1bP97952 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scn1bP97952 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scn1bP97952 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scn1bP97952 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.04□□□□□ -0.64
Scn1bP97952 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Scn1bP97952 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scn1bP97952 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scn1bP97952 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scn1bP97952 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scn1bP97952 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scn1bP97952 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.04□□□□□ -0.64
Scn1bP97952 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Scn1bP97952 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scn1bP97952 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.04□□□□□ -0.64
Scn1bP97952 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Scn1bP97952 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Scn1bP97952 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.04□□□□□ -0.64
Scn1bP97952 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Scn1bP97952 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Scn1bP97952 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.04□□□□□ -0.64
Scn1bP97952 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.04□□□□□ -0.64
Scn1bP97952 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.04□□□□□ -0.64
Scn1bP97952 Gm15429-201ENSMUST00000151268 798 ntBASIC11.04□□□□□ -0.64
Scn1bP97952 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scn1bP97952 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scn1bP97952 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Scn1bP97952 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.04□□□□□ -0.64
Scn1bP97952 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Scn1bP97952 Gm6983-201ENSMUST00000214912 628 ntBASIC11.04□□□□□ -0.64
Scn1bP97952 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.04□□□□□ -0.64
Scn1bP97952 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.04□□□□□ -0.64
Scn1bP97952 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scn1bP97952 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scn1bP97952 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.04□□□□□ -0.64
Scn1bP97952 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scn1bP97952 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scn1bP97952 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Scn1bP97952 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Scn1bP97952 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Scn1bP97952 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scn1bP97952 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scn1bP97952 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.04□□□□□ -0.64
Scn1bP97952 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.04□□□□□ -0.64
Scn1bP97952 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Scn1bP97952 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scn1bP97952 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Scn1bP97952 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.04□□□□□ -0.64
Scn1bP97952 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scn1bP97952 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Scn1bP97952 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.04□□□□□ -0.64
Scn1bP97952 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scn1bP97952 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scn1bP97952 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Scn1bP97952 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Scn1bP97952 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.03□□□□□ -0.64
Scn1bP97952 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.03□□□□□ -0.64
Scn1bP97952 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scn1bP97952 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Scn1bP97952 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scn1bP97952 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Scn1bP97952 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Scn1bP97952 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scn1bP97952 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Scn1bP97952 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Scn1bP97952 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scn1bP97952 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Scn1bP97952 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Scn1bP97952 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scn1bP97952 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Scn1bP97952 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Scn1bP97952 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scn1bP97952 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.03□□□□□ -0.64
Scn1bP97952 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scn1bP97952 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms