Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx3-2P97503 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx3-2P97503 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx3-2P97503 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx3-2P97503 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx3-2P97503 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx3-2P97503 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx3-2P97503 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx3-2P97503 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Nkx3-2P97503 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.49□□□□□ -0.57
Nkx3-2P97503 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.49□□□□□ -0.57
Nkx3-2P97503 Gm14760-201ENSMUST00000121831 999 ntBASIC11.49□□□□□ -0.57
Nkx3-2P97503 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx3-2P97503 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.49□□□□□ -0.57
Nkx3-2P97503 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Nkx3-2P97503 Mir5132-201ENSMUST00000175166 71 ntBASIC11.49□□□□□ -0.57
Nkx3-2P97503 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.49□□□□□ -0.57
Nkx3-2P97503 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx3-2P97503 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx3-2P97503 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.49□□□□□ -0.57
Nkx3-2P97503 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.49□□□□□ -0.57
Nkx3-2P97503 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx3-2P97503 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Nkx3-2P97503 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Nkx3-2P97503 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.49□□□□□ -0.57
Nkx3-2P97503 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.49□□□□□ -0.57
Nkx3-2P97503 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx3-2P97503 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx3-2P97503 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx3-2P97503 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.49□□□□□ -0.57
Nkx3-2P97503 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx3-2P97503 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.49□□□□□ -0.57
Nkx3-2P97503 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx3-2P97503 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx3-2P97503 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx3-2P97503 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx3-2P97503 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.49□□□□□ -0.57
Nkx3-2P97503 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx3-2P97503 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Nkx3-2P97503 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx3-2P97503 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.48□□□□□ -0.57
Nkx3-2P97503 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx3-2P97503 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx3-2P97503 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.48□□□□□ -0.57
Nkx3-2P97503 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx3-2P97503 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx3-2P97503 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx3-2P97503 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx3-2P97503 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx3-2P97503 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx3-2P97503 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nkx3-2P97503 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nkx3-2P97503 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx3-2P97503 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.48□□□□□ -0.57
Nkx3-2P97503 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.48□□□□□ -0.57
Nkx3-2P97503 Gm14277-201ENSMUST00000121195 360 ntBASIC11.48□□□□□ -0.57
Nkx3-2P97503 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Nkx3-2P97503 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx3-2P97503 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx3-2P97503 Gm45433-201ENSMUST00000209386 247 ntBASIC11.48□□□□□ -0.57
Nkx3-2P97503 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.48□□□□□ -0.57
Nkx3-2P97503 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.48□□□□□ -0.57
Nkx3-2P97503 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.48□□□□□ -0.57
Nkx3-2P97503 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.48□□□□□ -0.57
Nkx3-2P97503 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Nkx3-2P97503 Gm9996-201ENSMUST00000070359 913 ntBASIC11.48□□□□□ -0.57
Nkx3-2P97503 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx3-2P97503 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx3-2P97503 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Nkx3-2P97503 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx3-2P97503 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx3-2P97503 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.48□□□□□ -0.57
Nkx3-2P97503 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx3-2P97503 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Nkx3-2P97503 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx3-2P97503 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx3-2P97503 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.48□□□□□ -0.57
Nkx3-2P97503 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx3-2P97503 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.48□□□□□ -0.57
Nkx3-2P97503 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx3-2P97503 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.48□□□□□ -0.57
Nkx3-2P97503 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx3-2P97503 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx3-2P97503 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx3-2P97503 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx3-2P97503 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Nkx3-2P97503 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx3-2P97503 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx3-2P97503 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx3-2P97503 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx3-2P97503 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx3-2P97503 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Nkx3-2P97503 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx3-2P97503 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.47□□□□□ -0.57
Nkx3-2P97503 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx3-2P97503 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx3-2P97503 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Nkx3-2P97503 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx3-2P97503 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx3-2P97503 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms