Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC19.42■□□□□ 0.7
Cux2P70298 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cux2P70298 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC19.42■□□□□ 0.7
Cux2P70298 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cux2P70298 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cux2P70298 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cux2P70298 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cux2P70298 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cux2P70298 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cux2P70298 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cux2P70298 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cux2P70298 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cux2P70298 Gm45266-201ENSMUST00000210111 2173 ntBASIC19.42■□□□□ 0.7
Cux2P70298 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cux2P70298 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cux2P70298 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cux2P70298 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cux2P70298 Gm23745-201ENSMUST00000104230 125 ntBASIC19.42■□□□□ 0.7
Cux2P70298 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cux2P70298 Gm15329-201ENSMUST00000121408 155 ntBASIC19.42■□□□□ 0.7
Cux2P70298 Gm16305-201ENSMUST00000140747 556 ntBASIC19.42■□□□□ 0.7
Cux2P70298 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cux2P70298 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC19.42■□□□□ 0.7
Cux2P70298 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC19.42■□□□□ 0.7
Cux2P70298 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC19.42■□□□□ 0.7
Cux2P70298 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cux2P70298 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC19.42■□□□□ 0.7
Cux2P70298 CT010480.2-201ENSMUST00000225424 737 ntBASIC19.42■□□□□ 0.7
Cux2P70298 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cux2P70298 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cux2P70298 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cux2P70298 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cux2P70298 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cux2P70298 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cux2P70298 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cux2P70298 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cux2P70298 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cux2P70298 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cux2P70298 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cux2P70298 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cux2P70298 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cux2P70298 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Cux2P70298 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Cux2P70298 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC19.41■□□□□ 0.7
Cux2P70298 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cux2P70298 Gm23769-201ENSMUST00000104441 121 ntBASIC19.41■□□□□ 0.7
Cux2P70298 Gm12418-201ENSMUST00000118116 942 ntBASIC19.41■□□□□ 0.7
Cux2P70298 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cux2P70298 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC19.41■□□□□ 0.7
Cux2P70298 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cux2P70298 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cux2P70298 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Cux2P70298 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cux2P70298 Gm2345-201ENSMUST00000193451 589 ntBASIC19.41■□□□□ 0.7
Cux2P70298 Gm18010-201ENSMUST00000203553 202 ntBASIC19.41■□□□□ 0.7
Cux2P70298 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cux2P70298 Gm8255-201ENSMUST00000218693 305 ntBASIC19.41■□□□□ 0.7
Cux2P70298 AC154436.1-201ENSMUST00000227272 782 ntBASIC19.41■□□□□ 0.7
Cux2P70298 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cux2P70298 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC19.41■□□□□ 0.7
Cux2P70298 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Cux2P70298 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cux2P70298 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cux2P70298 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cux2P70298 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Cux2P70298 Rnf17-202ENSMUST00000223627 2077 ntBASIC19.4■□□□□ 0.7
Cux2P70298 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cux2P70298 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cux2P70298 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC19.4■□□□□ 0.7
Cux2P70298 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cux2P70298 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Cux2P70298 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC19.4■□□□□ 0.7
Cux2P70298 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Cux2P70298 Gm11475-201ENSMUST00000118482 476 ntBASIC19.4■□□□□ 0.7
Cux2P70298 Gm12129-201ENSMUST00000120104 1147 ntBASIC19.4■□□□□ 0.7
Cux2P70298 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cux2P70298 Gm4982-201ENSMUST00000160440 1098 ntBASIC19.4■□□□□ 0.7
Cux2P70298 Gm9630-201ENSMUST00000178304 885 ntBASIC19.4■□□□□ 0.7
Cux2P70298 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cux2P70298 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cux2P70298 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cux2P70298 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cux2P70298 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cux2P70298 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cux2P70298 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cux2P70298 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cux2P70298 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Cux2P70298 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cux2P70298 Map1b-203ENSMUST00000223725 2669 ntBASIC19.39■□□□□ 0.69
Cux2P70298 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cux2P70298 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cux2P70298 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC19.39■□□□□ 0.69
Cux2P70298 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cux2P70298 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cux2P70298 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Cux2P70298 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cux2P70298 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cux2P70298 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cux2P70298 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Cux2P70298 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms