Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Six5P70178 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Six5P70178 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Six5P70178 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Six5P70178 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Six5P70178 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.34□□□□□ -0.59
Six5P70178 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Six5P70178 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Six5P70178 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Six5P70178 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Six5P70178 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Six5P70178 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.34□□□□□ -0.59
Six5P70178 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.34□□□□□ -0.59
Six5P70178 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Six5P70178 Gm15276-201ENSMUST00000145953 498 ntBASIC11.34□□□□□ -0.59
Six5P70178 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Six5P70178 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Six5P70178 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Six5P70178 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.34□□□□□ -0.59
Six5P70178 Gm27320-201ENSMUST00000184892 109 ntBASIC11.34□□□□□ -0.59
Six5P70178 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.34□□□□□ -0.59
Six5P70178 Rprl1-202ENSMUST00000198476 238 ntBASIC11.34□□□□□ -0.59
Six5P70178 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Six5P70178 Gm45598-202ENSMUST00000210719 986 ntBASIC11.34□□□□□ -0.59
Six5P70178 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Six5P70178 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.34□□□□□ -0.59
Six5P70178 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Six5P70178 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Six5P70178 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Six5P70178 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Six5P70178 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Six5P70178 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Six5P70178 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Six5P70178 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Six5P70178 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Six5P70178 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.34□□□□□ -0.59
Six5P70178 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Six5P70178 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Six5P70178 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Six5P70178 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
Six5P70178 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Six5P70178 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Six5P70178 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Six5P70178 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Six5P70178 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Six5P70178 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Six5P70178 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Six5P70178 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Six5P70178 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Six5P70178 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Six5P70178 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Six5P70178 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.34□□□□□ -0.59
Six5P70178 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Six5P70178 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Six5P70178 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Six5P70178 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Six5P70178 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Six5P70178 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Six5P70178 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Six5P70178 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.33□□□□□ -0.6
Six5P70178 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Six5P70178 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Six5P70178 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Six5P70178 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.33□□□□□ -0.6
Six5P70178 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Six5P70178 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Six5P70178 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Six5P70178 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Six5P70178 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.33□□□□□ -0.6
Six5P70178 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Six5P70178 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Six5P70178 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Six5P70178 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Six5P70178 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Six5P70178 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.33□□□□□ -0.6
Six5P70178 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Six5P70178 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Six5P70178 Gm11989-201ENSMUST00000117240 672 ntBASIC11.33□□□□□ -0.6
Six5P70178 Gm11362-201ENSMUST00000118838 850 ntBASIC11.33□□□□□ -0.6
Six5P70178 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.33□□□□□ -0.6
Six5P70178 Gm13665-201ENSMUST00000120830 528 ntBASIC11.33□□□□□ -0.6
Six5P70178 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Six5P70178 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Six5P70178 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Six5P70178 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.33□□□□□ -0.6
Six5P70178 Gm5070-201ENSMUST00000177599 862 ntBASIC11.33□□□□□ -0.6
Six5P70178 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Six5P70178 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.33□□□□□ -0.6
Six5P70178 Gm38241-201ENSMUST00000192641 898 ntBASIC11.33□□□□□ -0.6
Six5P70178 Gm32999-201ENSMUST00000192693 562 ntBASIC11.33□□□□□ -0.6
Six5P70178 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Six5P70178 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.33□□□□□ -0.6
Six5P70178 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Six5P70178 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Six5P70178 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Six5P70178 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.33□□□□□ -0.6
Six5P70178 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Six5P70178 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Six5P70178 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Six5P70178 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms