Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC8.6□□□□□ -1.03
Rpl39P62892 Gm32025-201ENSMUST00000217960 307 ntBASIC8.6□□□□□ -1.03
Rpl39P62892 Wdyhv1-203ENSMUST00000226889 394 ntBASIC8.6□□□□□ -1.03
Rpl39P62892 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rpl39P62892 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rpl39P62892 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC8.6□□□□□ -1.03
Rpl39P62892 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC8.6□□□□□ -1.03
Rpl39P62892 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Rpl39P62892 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC8.6□□□□□ -1.03
Rpl39P62892 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC8.6□□□□□ -1.03
Rpl39P62892 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC8.6□□□□□ -1.03
Rpl39P62892 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Rpl39P62892 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rpl39P62892 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Rpl39P62892 AC093022.4-203ENSMUST00000228523 2657 ntBASIC8.6□□□□□ -1.03
Rpl39P62892 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Rpl39P62892 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rpl39P62892 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
Rpl39P62892 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rpl39P62892 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC8.6□□□□□ -1.03
Rpl39P62892 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Rpl39P62892 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rpl39P62892 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC8.6□□□□□ -1.03
Rpl39P62892 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Rpl39P62892 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rpl39P62892 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Rpl39P62892 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39P62892 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39P62892 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39P62892 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC8.59□□□□□ -1.03
Rpl39P62892 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC8.59□□□□□ -1.03
Rpl39P62892 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39P62892 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39P62892 Gm45677-201ENSMUST00000209975 1341 ntBASIC8.59□□□□□ -1.03
Rpl39P62892 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Rpl39P62892 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC8.59□□□□□ -1.03
Rpl39P62892 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39P62892 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Rpl39P62892 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39P62892 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39P62892 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39P62892 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39P62892 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39P62892 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Rpl39P62892 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39P62892 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39P62892 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39P62892 Gm9083-201ENSMUST00000120423 819 ntBASIC8.59□□□□□ -1.03
Rpl39P62892 Gm11964-201ENSMUST00000120982 444 ntBASIC8.59□□□□□ -1.03
Rpl39P62892 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39P62892 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39P62892 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Rpl39P62892 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
Rpl39P62892 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39P62892 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC8.59□□□□□ -1.03
Rpl39P62892 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC8.59□□□□□ -1.03
Rpl39P62892 Gm27331-201ENSMUST00000183705 60 ntBASIC8.59□□□□□ -1.03
Rpl39P62892 Gm9124-201ENSMUST00000191789 1092 ntBASIC8.59□□□□□ -1.03
Rpl39P62892 Gm9113-201ENSMUST00000192510 1018 ntBASIC8.59□□□□□ -1.03
Rpl39P62892 Gm9131-201ENSMUST00000193557 1089 ntBASIC8.59□□□□□ -1.03
Rpl39P62892 Gm9121-201ENSMUST00000193749 1071 ntBASIC8.59□□□□□ -1.03
Rpl39P62892 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39P62892 Gm20949-201ENSMUST00000206478 952 ntBASIC8.59□□□□□ -1.03
Rpl39P62892 Gm6007-201ENSMUST00000208170 823 ntBASIC8.59□□□□□ -1.03
Rpl39P62892 Gm8463-201ENSMUST00000208573 613 ntBASIC8.59□□□□□ -1.03
Rpl39P62892 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC8.59□□□□□ -1.03
Rpl39P62892 AC167013.1-201ENSMUST00000228592 202 ntBASIC8.59□□□□□ -1.03
Rpl39P62892 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39P62892 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
Rpl39P62892 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Rpl39P62892 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39P62892 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Rpl39P62892 Gm10146-201ENSMUST00000072739 309 ntBASIC8.59□□□□□ -1.03
Rpl39P62892 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39P62892 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39P62892 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Rpl39P62892 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39P62892 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Rpl39P62892 Gm38194-201ENSMUST00000194529 2211 ntBASIC8.59□□□□□ -1.03
Rpl39P62892 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39P62892 Gm9816-201ENSMUST00000122292 1414 ntBASIC8.59□□□□□ -1.03
Rpl39P62892 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Rpl39P62892 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC8.59□□□□□ -1.03
Rpl39P62892 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC8.59□□□□□ -1.03
Rpl39P62892 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39P62892 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC8.59□□□□□ -1.03
Rpl39P62892 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39P62892 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39P62892 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39P62892 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC8.59□□□□□ -1.03
Rpl39P62892 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC8.59□□□□□ -1.03
Rpl39P62892 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC8.59□□□□□ -1.03
Rpl39P62892 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39P62892 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC8.59□□□□□ -1.03
Rpl39P62892 Gm45342-201ENSMUST00000210903 1363 ntBASIC8.59□□□□□ -1.03
Rpl39P62892 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39P62892 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39P62892 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC8.59□□□□□ -1.03
Rpl39P62892 Gm43760-201ENSMUST00000202120 3015 ntBASIC8.59□□□□□ -1.04
Rpl39P62892 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms