Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm3P62311 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm3P62311 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm3P62311 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC10.98□□□□□ -0.65
Lsm3P62311 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm3P62311 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm3P62311 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm3P62311 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm3P62311 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm3P62311 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.98□□□□□ -0.65
Lsm3P62311 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Lsm3P62311 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Lsm3P62311 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm3P62311 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm3P62311 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.98□□□□□ -0.65
Lsm3P62311 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lsm3P62311 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.98□□□□□ -0.65
Lsm3P62311 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC10.98□□□□□ -0.65
Lsm3P62311 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm3P62311 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm3P62311 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm3P62311 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm3P62311 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm3P62311 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Lsm3P62311 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Lsm3P62311 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm3P62311 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm3P62311 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.97□□□□□ -0.65
Lsm3P62311 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm3P62311 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.97□□□□□ -0.65
Lsm3P62311 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm3P62311 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm3P62311 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC10.97□□□□□ -0.65
Lsm3P62311 Gm16342-201ENSMUST00000124025 1025 ntBASIC10.97□□□□□ -0.65
Lsm3P62311 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC10.97□□□□□ -0.65
Lsm3P62311 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Lsm3P62311 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm3P62311 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC10.97□□□□□ -0.65
Lsm3P62311 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm3P62311 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm3P62311 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm3P62311 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.97□□□□□ -0.65
Lsm3P62311 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm3P62311 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Lsm3P62311 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC10.97□□□□□ -0.65
Lsm3P62311 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm3P62311 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Lsm3P62311 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Lsm3P62311 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm3P62311 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.97□□□□□ -0.65
Lsm3P62311 Gm6605-201ENSMUST00000031488 2574 ntBASIC10.97□□□□□ -0.65
Lsm3P62311 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Lsm3P62311 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm3P62311 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm3P62311 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm3P62311 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm3P62311 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm3P62311 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm3P62311 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm3P62311 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm3P62311 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm3P62311 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm3P62311 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm3P62311 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm3P62311 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm3P62311 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm3P62311 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm3P62311 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm3P62311 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm3P62311 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Lsm3P62311 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm3P62311 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Lsm3P62311 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm3P62311 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm3P62311 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm3P62311 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC10.96□□□□□ -0.65
Lsm3P62311 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm3P62311 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Lsm3P62311 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.96□□□□□ -0.65
Lsm3P62311 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC10.96□□□□□ -0.65
Lsm3P62311 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.96□□□□□ -0.65
Lsm3P62311 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC10.96□□□□□ -0.65
Lsm3P62311 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC10.96□□□□□ -0.65
Lsm3P62311 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.96□□□□□ -0.65
Lsm3P62311 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Lsm3P62311 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Lsm3P62311 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Lsm3P62311 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Lsm3P62311 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Lsm3P62311 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Lsm3P62311 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Lsm3P62311 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Lsm3P62311 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Lsm3P62311 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.96□□□□□ -0.66
Lsm3P62311 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.95□□□□□ -0.66
Lsm3P62311 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm3P62311 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm3P62311 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Lsm3P62311 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.95□□□□□ -0.66
Lsm3P62311 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms