Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Gm12579-201ENSMUST00000118040 783 ntBASIC9.76□□□□□ -0.85
Lmo4P61969 Gm8731-201ENSMUST00000118088 412 ntBASIC9.76□□□□□ -0.85
Lmo4P61969 Gm14460-201ENSMUST00000121511 639 ntBASIC9.76□□□□□ -0.85
Lmo4P61969 Gm14665-201ENSMUST00000122294 557 ntBASIC9.76□□□□□ -0.85
Lmo4P61969 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC9.76□□□□□ -0.85
Lmo4P61969 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Lmo4P61969 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Lmo4P61969 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Lmo4P61969 Gm38117-201ENSMUST00000194653 939 ntBASIC9.76□□□□□ -0.85
Lmo4P61969 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC9.76□□□□□ -0.85
Lmo4P61969 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC9.76□□□□□ -0.85
Lmo4P61969 Gm44545-201ENSMUST00000208262 746 ntBASIC9.76□□□□□ -0.85
Lmo4P61969 Gm9132-201ENSMUST00000210182 832 ntBASIC9.76□□□□□ -0.85
Lmo4P61969 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC9.76□□□□□ -0.85
Lmo4P61969 Gm18974-201ENSMUST00000221478 1031 ntBASIC9.76□□□□□ -0.85
Lmo4P61969 CT030637.1-201ENSMUST00000228016 669 ntBASIC9.76□□□□□ -0.85
Lmo4P61969 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC9.76□□□□□ -0.85
Lmo4P61969 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Lmo4P61969 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lmo4P61969 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lmo4P61969 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lmo4P61969 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lmo4P61969 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC9.76□□□□□ -0.85
Lmo4P61969 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lmo4P61969 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lmo4P61969 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lmo4P61969 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC9.76□□□□□ -0.85
Lmo4P61969 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lmo4P61969 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC9.76□□□□□ -0.85
Lmo4P61969 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC9.76□□□□□ -0.85
Lmo4P61969 Gm29100-201ENSMUST00000187564 4410 ntBASIC9.76□□□□□ -0.85
Lmo4P61969 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lmo4P61969 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lmo4P61969 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lmo4P61969 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lmo4P61969 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Lmo4P61969 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lmo4P61969 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Lmo4P61969 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC9.75□□□□□ -0.85
Lmo4P61969 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Lmo4P61969 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lmo4P61969 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lmo4P61969 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Lmo4P61969 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Lmo4P61969 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lmo4P61969 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Lmo4P61969 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lmo4P61969 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Lmo4P61969 Gm43364-201ENSMUST00000196046 3274 ntBASIC9.75□□□□□ -0.85
Lmo4P61969 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Lmo4P61969 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lmo4P61969 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lmo4P61969 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lmo4P61969 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lmo4P61969 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Lmo4P61969 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC9.75□□□□□ -0.85
Lmo4P61969 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC9.75□□□□□ -0.85
Lmo4P61969 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Lmo4P61969 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC9.75□□□□□ -0.85
Lmo4P61969 Gm13888-201ENSMUST00000119148 422 ntBASIC9.75□□□□□ -0.85
Lmo4P61969 Gm12208-201ENSMUST00000122004 163 ntBASIC9.75□□□□□ -0.85
Lmo4P61969 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Lmo4P61969 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Lmo4P61969 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Lmo4P61969 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Lmo4P61969 Gm9540-201ENSMUST00000188230 478 ntBASIC9.75□□□□□ -0.85
Lmo4P61969 Gm29499-201ENSMUST00000189151 486 ntBASIC9.75□□□□□ -0.85
Lmo4P61969 Gm28329-201ENSMUST00000191208 689 ntBASIC9.75□□□□□ -0.85
Lmo4P61969 Gm29171-201ENSMUST00000191397 486 ntBASIC9.75□□□□□ -0.85
Lmo4P61969 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC9.75□□□□□ -0.85
Lmo4P61969 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Lmo4P61969 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC9.75□□□□□ -0.85
Lmo4P61969 Gm45550-201ENSMUST00000209380 946 ntBASIC9.75□□□□□ -0.85
Lmo4P61969 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Lmo4P61969 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC9.75□□□□□ -0.85
Lmo4P61969 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC9.75□□□□□ -0.85
Lmo4P61969 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lmo4P61969 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lmo4P61969 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC9.75□□□□□ -0.85
Lmo4P61969 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Lmo4P61969 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Lmo4P61969 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lmo4P61969 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Lmo4P61969 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Lmo4P61969 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lmo4P61969 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Lmo4P61969 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lmo4P61969 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lmo4P61969 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lmo4P61969 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lmo4P61969 Gm9796-201ENSMUST00000062249 2250 ntBASIC9.75□□□□□ -0.85
Lmo4P61969 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lmo4P61969 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lmo4P61969 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lmo4P61969 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lmo4P61969 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lmo4P61969 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC9.75□□□□□ -0.85
Lmo4P61969 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC9.74□□□□□ -0.85
Lmo4P61969 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Lmo4P61969 Gm44414-201ENSMUST00000203660 2109 ntBASIC9.74□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms