Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a1P61620 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Sec61a1P61620 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a1P61620 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a1P61620 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Sec61a1P61620 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Sec61a1P61620 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a1P61620 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.69□□□□□ -0.7
Sec61a1P61620 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC10.69□□□□□ -0.7
Sec61a1P61620 Mir8109-201ENSMUST00000184375 117 ntBASIC10.69□□□□□ -0.7
Sec61a1P61620 Gm4768-201ENSMUST00000206199 686 ntBASIC10.69□□□□□ -0.7
Sec61a1P61620 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a1P61620 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC10.69□□□□□ -0.7
Sec61a1P61620 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a1P61620 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC10.69□□□□□ -0.7
Sec61a1P61620 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a1P61620 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a1P61620 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Sec61a1P61620 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a1P61620 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a1P61620 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC10.69□□□□□ -0.7
Sec61a1P61620 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a1P61620 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a1P61620 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a1P61620 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a1P61620 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a1P61620 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a1P61620 Gm38157-201ENSMUST00000194178 1698 ntBASIC10.69□□□□□ -0.7
Sec61a1P61620 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a1P61620 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a1P61620 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Sec61a1P61620 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a1P61620 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Sec61a1P61620 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.69□□□□□ -0.7
Sec61a1P61620 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a1P61620 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a1P61620 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Sec61a1P61620 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a1P61620 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.68□□□□□ -0.7
Sec61a1P61620 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.68□□□□□ -0.7
Sec61a1P61620 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a1P61620 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a1P61620 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Sec61a1P61620 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a1P61620 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.68□□□□□ -0.7
Sec61a1P61620 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a1P61620 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a1P61620 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a1P61620 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC10.68□□□□□ -0.7
Sec61a1P61620 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a1P61620 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Sec61a1P61620 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Sec61a1P61620 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a1P61620 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Sec61a1P61620 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC10.68□□□□□ -0.7
Sec61a1P61620 Gm11793-201ENSMUST00000120433 981 ntBASIC10.68□□□□□ -0.7
Sec61a1P61620 Gm12291-201ENSMUST00000121627 311 ntBASIC10.68□□□□□ -0.7
Sec61a1P61620 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a1P61620 Gm16379-201ENSMUST00000161469 348 ntBASIC10.68□□□□□ -0.7
Sec61a1P61620 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC10.68□□□□□ -0.7
Sec61a1P61620 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Sec61a1P61620 Gm27501-201ENSMUST00000183599 107 ntBASIC10.68□□□□□ -0.7
Sec61a1P61620 Gm8762-201ENSMUST00000193486 339 ntBASIC10.68□□□□□ -0.7
Sec61a1P61620 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.68□□□□□ -0.7
Sec61a1P61620 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.68□□□□□ -0.7
Sec61a1P61620 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Sec61a1P61620 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a1P61620 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a1P61620 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Sec61a1P61620 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a1P61620 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a1P61620 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a1P61620 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a1P61620 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a1P61620 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a1P61620 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a1P61620 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a1P61620 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a1P61620 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.68□□□□□ -0.7
Sec61a1P61620 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a1P61620 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
Sec61a1P61620 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a1P61620 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a1P61620 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a1P61620 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a1P61620 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sec61a1P61620 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.68□□□□□ -0.7
Sec61a1P61620 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.68□□□□□ -0.7
Sec61a1P61620 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a1P61620 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a1P61620 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a1P61620 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a1P61620 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a1P61620 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a1P61620 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Sec61a1P61620 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a1P61620 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a1P61620 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a1P61620 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a1P61620 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms